DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and GLO3

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_011048.1 Gene:GLO3 / 856859 SGDID:S000000924 Length:493 Species:Saccharomyces cerevisiae


Alignment Length:571 Identity:144/571 - (25%)
Similarity:235/571 - (41%) Gaps:137/571 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SKQEIESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRSTNLDT 73
            ::|..:.||.:|.:...|:.||||..|.|||:||.:|:.:||.|||||||:|||:|||:|:.|| 
Yeast    11 TEQTTQQVFQKLGSNMENRVCFDCGNKNPTWTSVPFGVMLCIQCSAVHRNMGVHITFVKSSTLD- 74

  Fly    74 NWTWLQLRQMQLGGNANAAQFFRAH------NCSTTDAQVKYNSRAAQLYRDKLCAQAQQAMKTH 132
            .||...||:.:||||..|..||..:      |.:..||:.||.|..|:.|:..|..:.|:.|:.:
Yeast    75 KWTINNLRRFKLGGNHKARDFFLKNNGKQLLNTANVDAKTKYTSPVAKKYKIHLDKKVQKDMELY 139

  Fly   133 GTKLHLEQTDKSEG-----NEAARE-------EDFFAQCDNEVDFNVQNNNVSKQDPNPPTVAPV 185
            .::|.|...|.|:.     ::|:|.       :|||:.....     .:|:.||.:.|..::|| 
Yeast   140 PSELVLNGQDSSDSPLDTDSDASRSTSKENSVDDFFSNWQKP-----SSNSSSKLNVNTGSLAP- 198

  Fly   186 ISVETQQGGAPSVNLL---NSVVPAAVPSSIGARKVQPKKGGLGARKVGGLGATKVKTNFADIEA 247
              .....|..|...:.   :|::.|                   :||       |...|..|.:.
Yeast   199 --KNNTTGSTPKTTVTKTRSSILTA-------------------SRK-------KPVLNSQDKKK 235

  Fly   248 RANAANEMKTSAAAAPVVKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTMDPAKAKQMERL 312
            .:..::..|.:...|..|....|||..:..  .:.|.||...:.|...:..|........|....
Yeast   236 HSILSSSRKPTRLTAKKVDKSQAEDLFDQF--KKEAQQEKEDEFTNSSSSTKIRQNDYDSQFMNN 298

  Fly   313 GMGFNLRGSDMAHSALGDMETIQQSAAPKAKLSLLESENFFTDFSLYGNSSSGGGGGGSSEKRES 377
            ..|.|       ::::.|:.|               ..:.|.||.   |.:|........|::::
Yeast   299 SKGNN-------NNSIDDINT---------------QPDEFNDFL---NDTSNSFDTTRKEQQDT 338

  Fly   378 SVGGTSKLDKFELDALGYETIEPIGGSHSNITSMFSRSNDYDKPKTSAPVKKNSGSSQTHTKGGT 442
            .   |.|..|     ||:       |...|      .:||         :.|....||...:|..
Yeast   339 L---TPKFAK-----LGF-------GMTMN------DAND---------LAKQQKESQKIAQGPR 373

  Fly   443 STDPVIAQQKFGNSKGFGSDQYFA----SEQSSADVSASLNRFQGSRAISSSDYFGD-------G 496
            .|..:  .:::|..|...|||.|.    .|.::.:....|..|..:.:||||.|||:       |
Yeast   374 YTGRI--AERYGTQKAISSDQLFGRGSFDEAANREAHDKLKTFDNATSISSSSYFGEDKEVDEFG 436

  Fly   497 SPGGTGGNRASS----------VNFSA-PDLDVESVKESVRQGVHKVAGRL 536
            :|..:.|:.|.:          ::|:| .|.:::.:::.|.||..|:...|
Yeast   437 NPINSSGSGAGNFDGRNSNNGFIDFNASADDELQMLRDVVEQGAEKLGSYL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 51/109 (47%)
GLO3NP_011048.1 COG5347 9..363 CDD:227651 112/443 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341574
Domainoid 1 1.000 108 1.000 Domainoid score I1433
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 162 1.000 Inparanoid score I1051
Isobase 1 0.950 - 0 Normalized mean entropy S2764
OMA 1 1.010 - - QHG52037
OrthoFinder 1 1.000 - - FOG0001852
OrthoInspector 1 1.000 - - oto99054
orthoMCL 1 0.900 - - OOG6_101784
Panther 1 1.100 - - LDO PTHR45686
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R495
SonicParanoid 1 1.000 - - X1214
TreeFam 00.000 Not matched by this tool.
1413.780

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