DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ArfGAP3 and ARFGAP2

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_005253223.1 Gene:ARFGAP2 / 84364 HGNCID:13504 Length:560 Species:Homo sapiens


Alignment Length:612 Identity:223/612 - (36%)
Similarity:318/612 - (51%) Gaps:119/612 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AAGPSKQEIESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRST 69
            ||.|:|.||:::|.||||.|.||:||||.||.|:|:|:|||:|:|||||.|||:|||||:|:|||
Human     2 AAEPNKTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRST 66

  Fly    70 NLDTNWTWLQLRQMQLGGNANAAQFFRAHNCSTTDAQVKYNSRAAQLYRDKLCAQAQQAMKTHGT 134
            .||:||.|.|||.||:||||||..|||.|.|:..||..||||||||:||:|:......|:..|||
Human    67 ELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGSAALARHGT 131

  Fly   135 KLHLEQTDKSEGNEA--AREEDFF-----------AQCDNE--VDFNV----------------- 167
            .|.::....:..|.:  .::.|||           |.|..|  .:.:|                 
Human   132 DLWIDNMSSAVPNHSPEKKDSDFFTEHTQVLVGLGASCQQEWLTEASVIWPPFQPPAWDAPATEP 196

  Fly   168 ----------QNNNVSKQDPNPPT----VAPVISVE----TQQGGAPSVNLLNSVVPAAVPSSIG 214
                      :::.:::.:..|.|    .:|..|:|    :.:|..|:..|.:|:        ||
Human   197 SGTQQPAPSTESSGLAQPEHGPNTDLLGTSPKASLESVYLSAKGALPARELKSSI--------IG 253

  Fly   215 ARKVQPKKGGLGARKVGGLGATKVKT-NFADIEARANAANEMKTSAAAAPVVKPQTAEDELETVA 278
            .:|....|.||||:|  ||||.||.: :|::||.:|..|.:::...||.  .|.| ||:.:  ||
Human   254 KKKPAAAKKGLGAKK--GLGAQKVSSQSFSEIERQAQVAEKLREQQAAD--AKKQ-AEESM--VA 311

  Fly   279 SMRLAYQELSMQKTREEAKLKTMDPAKAKQMERLGMGFNLRGSDMAHSALGDMETIQQSAAPKAK 343
            |||||||||.:.:.:||.||:.::..|.:|.||||||...| |.::||.|.:|:.|:|.....||
Human   312 SMRLAYQELQIDRKKEEKKLQNLEGKKREQAERLGMGLVSR-SSVSHSVLSEMQVIEQETPVSAK 375

  Fly   344 LSLLESENFFTDFSLYG--------NSSSGGGGGGSSEKRESSVGGTSKLDKFE--LDALGYETI 398
            .|..:.: .|.|...:.        |..|.|...||....:::.|    :|:.|  ...:...:|
Human   376 SSRSQLD-LFDDVGTFASGPPKYKDNPFSLGESFGSRWDTDAAWG----MDRVEEKEPEVTISSI 435

  Fly   399 EPIGGSHSNITSMFSRSNDYDKPKTSAPVKKNSGSSQTHTKGGTSTDPVIAQQKFGNSKGFGSDQ 463
            .||....:|...:.|||:..:             ||:             |:|||..:|...||.
Human   436 RPISERATNRREVESRSSGLE-------------SSE-------------ARQKFAGAKAISSDM 474

  Fly   464 YFASE-QSSADVSASLNRFQGSRAISSSDYFGDGSPGGTGGNRASSVNFS--APDLDVESVKESV 525
            :|..| .:..:..:.|.:..||.||||||.|||..    |.:.|.||:..  .|..|:...|   
Human   475 FFGREVDAEYEARSRLQQLSGSSAISSSDLFGDMD----GAHGAGSVSLGNVLPTADIAQFK--- 532

  Fly   526 RQGVHKVAGRLSNLANDVMTSWQDKYG 552
             |||..|||:::.|||.||.|.||:||
Human   533 -QGVKSVAGKMAVLANGVMNSLQDRYG 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 71/103 (69%)
ARFGAP2XP_005253223.1 PLN03114 1..510 CDD:178661 200/558 (36%)
ArfGap 11..117 CDD:279720 71/105 (68%)
RILP-like 266..>338 CDD:304877 34/78 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 171 1.000 Domainoid score I3748
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8735
Inparanoid 1 1.050 327 1.000 Inparanoid score I2475
Isobase 1 0.950 - 0 Normalized mean entropy S2764
OMA 1 1.010 - - QHG52037
OrthoDB 1 1.010 - - D1155557at2759
OrthoFinder 1 1.000 - - FOG0001852
OrthoInspector 1 1.000 - - otm40432
orthoMCL 1 0.900 - - OOG6_101784
Panther 1 1.100 - - O PTHR45686
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R495
SonicParanoid 1 1.000 - - X1214
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

Return to query results.
Submit another query.