DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and NIG

DIOPT Version :10

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_193071.2 Gene:NIG / 826966 AraportID:AT4G13350 Length:602 Species:Arabidopsis thaliana


Alignment Length:552 Identity:115/552 - (20%)
Similarity:184/552 - (33%) Gaps:179/552 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AGPSKQE--IESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRS 68
            ||..|::  .|.:...|...|.||.|.:|.:..|.:...|:..|:|.:||.:||.. .|.  |:|
plant     2 AGRVKEDEKNEKIIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREF-THR--VKS 63

  Fly    69 TNLDTNWTWLQLRQMQLGGNANAAQ-FFRAHNCSTTDAQVKYNSRAAQLYRDKLCAQAQQAMKTH 132
            .:: ..:|..::..::.|||.:|.. :|:.                                   
plant    64 ISM-AKFTSQEVTALKEGGNQHAKDIYFKG----------------------------------- 92

  Fly   133 GTKLHLEQTDKS--EGNEAAREEDFFAQCDNEVDFNVQNNNVSKQDPNPPTVAPVISVETQQGGA 195
                 |:|..:|  :|:...|..||.    ..|..|.:..|....|.:|.        ||:    
plant    93 -----LDQQRQSVPDGSNVERLRDFI----RHVYVNKRYTNEKNDDKSPS--------ETR---- 136

  Fly   196 PSVNLLNSVVPAAVPSSIGARKVQPKKGGLGARKVGGLGATKVKTNFADIEARANAANEMKTSAA 260
                           ||.|:|. .|.:.|.. |:.|...:...::...:..:| ||.|..| |.|
plant   137 ---------------SSSGSRS-PPYEDGYD-RRYGDRSSPGGRSPGFETGSR-NAVNNRK-SPA 182

  Fly   261 AAPVVKPQTAEDELETVASMRLAYQELSMQKTREEAK--------LKTMDPAKAKQMERLGMGFN 317
            ...::.....||             ....:||.||..        |.:..|..|:.:..:     
plant   183 RPEILNDWRRED-------------RFGGRKTSEEGSQSPEQVKDLGSASPPVARPVREI----- 229

  Fly   318 LRGSDMAHSALGD-METIQQSAAPKAKLSLLESENFFTDFSLYGNSSSGGGGGGSSEKRESSVGG 381
                      ||| :..::....||..:    |.|  ||.|.:..|.:......|:.::...|..
plant   230 ----------LGDSVIPLRVGEPPKPPV----SRN--TDASAHAKSGTSLSSLMSTNEKPPEVKL 278

  Fly   382 TSKLDKFELDALGYETIEPIGGSHSNITSMFSRSNDYDKPKTS----------APVKKNSGSSQT 436
            .:.|...:.|. .:||..|   |.:....:.:.|....:|.||          ||...:...||.
plant   279 ETALSLIDFDT-DFETPAP---SVAIQAPLSTTSQPAPQPTTSSNDNWASFDAAPSAPSLNVSQP 339

  Fly   437 HTKGGTSTDPVIAQQKFGNS--------------KGFGSDQYFA---SEQSS------------- 471
            ...|.| .|.:::|....:|              .|..:.|.||   :|.||             
plant   340 PPSGNT-LDSLLSQLAVTSSVPGQASTPSNGPVNLGHSTSQIFAPFQNEHSSEQPWNTALASNVQ 403

  Fly   472 ADVSA-SLNRFQG--SRAISSSDYFGDGSPGG 500
            ..:|| ||...||  |..:.||:.    .|.|
plant   404 RSMSAPSLQPLQGVPSGGLQSSEV----KPSG 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap_ArfGap2_3_like 12..127 CDD:350060 24/117 (21%)
NIGNP_193071.2 PLN03131 3..515 CDD:178677 114/551 (21%)

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