DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ArfGAP3 and AGD6

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001030854.1 Gene:AGD6 / 824538 AraportID:AT3G53710 Length:459 Species:Arabidopsis thaliana


Alignment Length:532 Identity:134/532 - (25%)
Similarity:201/532 - (37%) Gaps:139/532 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRSTNLDTNWTWLQLRQMQ 84
            |::||.||.|.|||.|.|.|:||:||||:|::||..||.||||::||||..:| :|:.:|:::|:
plant    10 LQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMD-SWSAIQIKKME 73

  Fly    85 LGGNANAAQFFRAHN-CSTTDAQVKYNSRAAQLYRDKLCAQAQ-------QAMKTHGTKLHLEQT 141
            .|||....:||..:. ...||...||||.||.:|||::.|.|:       ..:|....|..|.| 
plant    74 AGGNERLNKFFAQYGIAKETDIISKYNSNAASVYRDRIQALAEGRPWNDPPVVKEANKKPPLAQ- 137

  Fly   142 DKSEGNEAAREEDFFAQCDNE-------------VDFNVQNN-------NVSKQDPNPPTVAPVI 186
             ...||........:...||:             .||....|       :.|.:|     :....
plant   138 -GGYGNNNNNNNGGWDSWDNDDSYKSDMRRNQSANDFRASGNREGAHVKSKSSED-----IYTRS 196

  Fly   187 SVETQQGGAPSV----NLLNSVVPAAVPSSIGARKVQPKKGGLGARKVGGLGATKV---KTN--- 241
            .:|....|..|.    ...|...|..:|         |.:||    |..|.|::..   :.|   
plant   197 QLEASAAGKESFFARRMAENESKPEGLP---------PSQGG----KYVGFGSSSAPPPRNNQQD 248

  Fly   242 --FADIEARANAANEMKTSAA--AAPVVKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTMD 302
              |:.:.......:.:..|||  ||.||:..|.    |..:.::....:..:.:|......||  
plant   249 DVFSVVSQGFGRLSLVAASAAQSAASVVQTGTK----EFTSKVKEGGYDHKVSETVNVVANKT-- 307

  Fly   303 PAKAKQMERLGMGFNLRGSDMAHSALGDMETIQQSAAPKAKLSLLESENFFTDFSLYGNSSSGGG 367
                              :::.|...|.|:.:...|..|.       |.|..:.|...|..|...
plant   308 ------------------TEIGHRTWGIMKGVMAMATQKV-------EEFTKEGSTSWNQQSENE 347

  Fly   368 G-------GGSSEKRESSVGGTSKLDKFELDALGYETIEPIGGSHSNITSMFSRSNDYD------ 419
            |       |..::...|||||            |........|.::|    ...||.:|      
plant   348 GNGYYQNFGNGNKAANSSVGG------------GRPQSSSTSGHYNN----SQNSNSWDSWGENE 396

  Fly   420 KPKTSAPVKKNSGSSQTHTKGGTSTDPVIAQQKFGNSKGFGSDQYFASEQSSADVSASLNRFQGS 484
            ..||.|...|.| |:.....|.|..|.       .::|..|.|.::   ||:.|..::     |.
plant   397 NKKTEAVAPKGS-SASNDDDGWTGWDD-------HDAKDDGFDGHY---QSAGDKKSA-----GH 445

  Fly   485 RAISSSDYFGDG 496
            ...|.:.:.|.|
plant   446 NGKSDTAWTGGG 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 51/101 (50%)
AGD6NP_001030854.1 ArfGap 7..116 CDD:279720 52/106 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1155557at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.