DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ArfGAP3 and AGD7

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001031503.1 Gene:AGD7 / 818331 AraportID:AT2G37550 Length:456 Species:Arabidopsis thaliana


Alignment Length:545 Identity:129/545 - (23%)
Similarity:208/545 - (38%) Gaps:157/545 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRSTNLDTNWTWLQLRQMQ 84
            |::||.||.|.||:.|.|.|:|::||||:|::||..||.||||::||||..:| :|:.:|:::|.
plant    10 LQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMD-SWSEIQIKKMD 73

  Fly    85 LGGNANAAQFFRAHNCS-TTDAQVKYNSRAAQLYRDKLCAQAQQAMKTHGTKLHLEQTDKSEGNE 148
            .|||.....|...:..| .||...||||.||.:|||::.|.|:                      
plant    74 AGGNERLNNFLAQYGISKETDIISKYNSNAASVYRDRIQALAE---------------------- 116

  Fly   149 AAREEDFFAQCDNEVDFNVQNNNVSKQDPNPPTVAPVISVETQQGGAPSVNLLNSVVPAAVPSSI 213
                                    .:|..:||.|.     |:..||     |:|...|.:     
plant   117 ------------------------GRQWRDPPIVK-----ESVGGG-----LMNKKPPLS----- 142

  Fly   214 GARKVQPKKGGLGARKVGGLGATKVKTNFADIEARAN-AANEMKTSAAAAPVVKPQTAED----- 272
                    :||......||........:|...:.|.| :|.:.::|.......|.:::||     
plant   143 --------QGGGRDSGNGGWDNWDNDDSFRSTDMRRNQSAGDFRSSGGRGAPAKSKSSEDIYSRS 199

  Fly   273 ELETVASMRLAYQELSMQKTREEAKLKTMDPAKAKQMERLGMGFNLRGSDMAHSALGDMETIQQS 337
            :||..|:.:.::  .:.:....|:|.:.:.|::..:.    :||   ||             ...
plant   200 QLEASAANKESF--FAKRMAENESKPEGLPPSQGGKY----VGF---GS-------------SPG 242

  Fly   338 AAPKAKLSLLESENFFTDFSLYGNSSSGGG--------GGGSSEKRESSVGG---------TSKL 385
            .||::                  |..||||        |.|......:|...         |||:
plant   243 PAPRS------------------NQQSGGGDVFSVMSEGFGRLSLVAASAANVVQTGTMEFTSKV 289

  Fly   386 DKFELDALGYETIEPIG-----------GSHSNITSMFSRS-NDYDKPKTSA--PVKKNSGSSQT 436
            .:..||....||:..:.           |....:.::.|:. .::.|.:.|.  ...|..|:...
plant   290 KEGGLDQTVSETVNVVASKTTEIGQRTWGIMKGVMAIASQKVEEFTKEEASTWNQQNKTEGNGYY 354

  Fly   437 HTKG-GTSTDPVIAQQKFGNSK--GFGSDQYFASEQSSADVSASLN-RFQGSRAISSSDYFGDGS 497
            ...| |..|    |...||.|:  ..|.:..:.:..|..|.....| :.:.:..:|:|:...||.
plant   355 QNSGIGNKT----ANSSFGGSQSSSSGHNNSYRNSNSWDDWGEENNSKKEAAPKVSTSNDDDDGG 415

  Fly   498 PGGTGGNRASSVNF-SAPDLDVESV 521
            ..|...|.|...:| ..|..|.:||
plant   416 WAGWDDNDAKDDDFYYQPASDKKSV 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 49/101 (49%)
AGD7NP_001031503.1 ArfGap_ArfGap1 3..117 CDD:350059 51/153 (33%)
COG5347 5..>258 CDD:227651 90/357 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1155557at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.