DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and git2a

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_005165241.1 Gene:git2a / 793882 ZFINID:ZDB-GENE-060526-267 Length:804 Species:Danio rerio


Alignment Length:564 Identity:114/564 - (20%)
Similarity:194/564 - (34%) Gaps:184/564 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRSTNLDTNWTWLQLRQM 83
            |||   .::.|.||:...|.|:||..|:.||.:|.:|||:||.|.:.||..: :|:|...||:.:
Zfish    14 RLR---NSEVCADCSTSDPRWASVNRGVLICDECCSVHRSLGRHNSQVRHLS-NTSWPPTQLQMV 74

  Fly    84 QLGGNANAAQFFRAHNCSTTDAQVKYNSRAAQLYR----DKLCAQAQQAMKTHGTKLHLEQTD-- 142
                                  |..||:.|..::.    |.....:.:....|..|||..:.|  
Zfish    75 ----------------------QTLYNNGANAIWEHTLLDPSSIMSSKRKPNHQDKLHPNKADFI 117

  Fly   143 KSEGNEAA-------REEDFFAQCD--NEVDFNVQNNNVSKQDPNPPTVAPVISVETQ------- 191
            |::....|       |::|..|..|  .::..:|:..|:.       |...::|:..|       
Zfish   118 KAKYQMLAYVHRLPCRDDDSTAAADLSKQLHSSVRTGNLE-------TCLRLLSLGAQANYFHPE 175

  Fly   192 QGGAP--SVNLLNSVVPAAVPSSIGARKVQPKKGGLGARKVGGLGATKVKTNFADIEARANAANE 254
            :|..|  .......|..|.:....||....|...|            |...|:|......:.|:.
Zfish   176 KGNTPLHIAAKAGQVCQAELLCVYGADPGAPDSSG------------KTPINYARQAGHQDLADR 228

  Fly   255 MKTSAAAAPVVKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTMDPAKAKQMERLGMGFNLR 319
            :.                |::...:.|||:. |..:|...::....:.|..|.:        |: 
Zfish   229 LV----------------EIQYELTDRLAFY-LCGRKPDHKSGQHFIIPQMADR--------NV- 267

  Fly   320 GSDMAHSALGDMETIQQSAAPKAKLSLLESENFFTDFSL--YGNSSSGGGGGGSSEKRESSVGGT 382
                      .:|..:.:.|.|.||..| |::.|.:.::  |                       
Zfish   268 ----------SVELTEFAKAAKRKLQSL-SDHLFEELAMDVY----------------------- 298

  Fly   383 SKLDKFELDALGYETIEPIGGSHSNITSMFSRSNDYDKPKTSAP-VKKNSGSSQTHTKGGTSTDP 446
            .::|:.|.||:...|     .:||.:.:          ..|..| :..|...|.|..:|      
Zfish   299 DEVDRRETDAVWLAT-----QNHSTLVT----------ETTVVPFLPVNPEYSSTRNQG------ 342

  Fly   447 VIAQQKFGNSKGFGSDQYFASEQSS--ADVSASLNRFQGSRAISSS----DYFGDGSPGGTGGNR 505
               :||..        ::.|.|.::  .|:.:...|.|....:.|.    |.|..     :||:|
Zfish   343 ---RQKLA--------RFNAHEFATLVIDILSDAKRRQHGNPVPSPKDNVDVFFK-----SGGSR 391

  Fly   506 --ASSVNFSAPDLDV----ESVKESVRQGVHKVAGRLSNLANDV 543
              :.|.....||.|.    |.....:|.|   .|.|..:|.:|:
Zfish   392 HGSESQEIDQPDYDSVASDEDTDTDLRMG---KADRTKSLDSDL 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 31/105 (30%)
git2aXP_005165241.1 ArfGap 12..134 CDD:214518 38/145 (26%)
Ank_2 147..239 CDD:289560 18/126 (14%)
ANK <147..230 CDD:238125 17/101 (17%)
ANK repeat 147..175 CDD:293786 5/34 (15%)
ANK repeat 177..207 CDD:293786 6/29 (21%)
GIT_SHD 278..306 CDD:285690 8/51 (16%)
GIT_SHD 342..369 CDD:285690 7/43 (16%)
GIT_CC 426..490 CDD:293167 2/7 (29%)
GIT1_C 632..798 CDD:289013
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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