DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and Acap2

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_006522806.1 Gene:Acap2 / 78618 MGIID:1925868 Length:816 Species:Mus musculus


Alignment Length:258 Identity:59/258 - (22%)
Similarity:110/258 - (42%) Gaps:54/258 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASPAAG------PSKQEI---ESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHR 57
            :||:.|      .||:::   ||...|::..|.|.||.||....|.|:|:..||.:||:||.:||
Mouse   389 SSPSTGSLDSGNESKEKLLKGESALQRVQCIPGNTSCCDCGLADPRWASINLGITLCIECSGIHR 453

  Fly    58 NLGVHLTFVRSTNLDTNWTW--------------------------LQLRQMQLGGNANAAQFFR 96
            :||||.:.|||..||   ||                          :.:::.|.|.......:.|
Mouse   454 SLGVHFSKVRSLTLD---TWEPELLKLMCELGNDVINRVYEAKLEKMGVKKPQPGQRQEKEAYIR 515

  Fly    97 AHNCSTTDAQVKYNSRAAQLYRDK-LCAQAQQAMKTHGTKLHLEQTDKSEGNEAAREEDFFAQCD 160
            |......... ||::..:...::| :.:::.:..:....:..:.....:..::.||.|..|  |.
Mouse   516 AKYVERKFVD-KYSALLSPSEQEKRIISKSCEDQRLSHARASVHTPVAAVTSDEARRESLF--CP 577

  Fly   161 NEVDFNVQNNNVSKQDPNPPTVAPVISVETQQGGAPSVNLLNSVVPAAVPSSIGARKVQPKKG 223
            :|:|     :..|..|    |.:.:.|:::...|   :...:.....::||::.|..:...:|
Mouse   578 DELD-----SLFSYFD----TSSKLRSIKSNDSG---IQQCSEDGRESLPSTVSANSLYEPEG 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 36/130 (28%)
Acap2XP_006522806.1 BAR_ACAP2 18..217 CDD:153322
PH_ACAP 273..376 CDD:270070
COG5347 398..>635 CDD:227651 56/249 (22%)
ArfGap_ACAP2 410..524 CDD:350076 35/116 (30%)
Ank_4 648..699 CDD:372654
ANK repeat 676..709 CDD:293786
PTZ00322 680..>764 CDD:140343
ANK repeat 711..742 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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