DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ArfGAP3 and Acap2

DIOPT Version :10

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_006522806.1 Gene:Acap2 / 78618 MGIID:1925868 Length:816 Species:Mus musculus


Alignment Length:258 Identity:59/258 - (22%)
Similarity:110/258 - (42%) Gaps:54/258 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASPAAG------PSKQEI---ESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHR 57
            :||:.|      .||:::   ||...|::..|.|.||.||....|.|:|:..||.:||:||.:||
Mouse   389 SSPSTGSLDSGNESKEKLLKGESALQRVQCIPGNTSCCDCGLADPRWASINLGITLCIECSGIHR 453

  Fly    58 NLGVHLTFVRSTNLDTNWTW--------------------------LQLRQMQLGGNANAAQFFR 96
            :||||.:.|||..||   ||                          :.:::.|.|.......:.|
Mouse   454 SLGVHFSKVRSLTLD---TWEPELLKLMCELGNDVINRVYEAKLEKMGVKKPQPGQRQEKEAYIR 515

  Fly    97 AHNCSTTDAQVKYNSRAAQLYRDK-LCAQAQQAMKTHGTKLHLEQTDKSEGNEAAREEDFFAQCD 160
            |......... ||::..:...::| :.:::.:..:....:..:.....:..::.||.|..|  |.
Mouse   516 AKYVERKFVD-KYSALLSPSEQEKRIISKSCEDQRLSHARASVHTPVAAVTSDEARRESLF--CP 577

  Fly   161 NEVDFNVQNNNVSKQDPNPPTVAPVISVETQQGGAPSVNLLNSVVPAAVPSSIGARKVQPKKG 223
            :|:|     :..|..|    |.:.:.|:::...|   :...:.....::||::.|..:...:|
Mouse   578 DELD-----SLFSYFD----TSSKLRSIKSNDSG---IQQCSEDGRESLPSTVSANSLYEPEG 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap_ArfGap2_3_like 12..127 CDD:350060 38/144 (26%)
Acap2XP_006522806.1 BAR_ACAP2 18..217 CDD:153322
PH_ACAP 273..376 CDD:270070
COG5347 398..>635 CDD:227651 56/249 (22%)
ArfGap_ACAP2 410..524 CDD:350076 35/116 (30%)
ANKYR <648..779 CDD:440430
ANK repeat 676..709 CDD:293786
ANK repeat 711..742 CDD:293786
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.