DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and 9030624G23Rik

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001369748.1 Gene:9030624G23Rik / 66808 MGIID:1914058 Length:591 Species:Mus musculus


Alignment Length:330 Identity:57/330 - (17%)
Similarity:90/330 - (27%) Gaps:109/330 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 APTWSSVTYGIFICID-CSAVHRNL----GVHLTFV---------------RSTNLDTNW----- 75
            |||.||.|.....|.| .:|:..:.    .||:.|.               :...|:|.|     
Mouse    20 APTASSFTTRTAQCRDTAAAIEEDAVTYDDVHVNFTGEEWKLLDPSQKSLYKDVMLETYWNLTVI 84

  Fly    76 --TWLQLRQMQLGGNANAAQFFRAHNCSTTDAQVKY--NSRAAQLYRDKLCAQAQQAMKTHGTKL 136
              ||             .......| |.::....:|  |....:||      :..:..|......
Mouse    85 GYTW-------------ETHHIEGH-CQSSRRNERYVSNHSGEKLY------ECNERSKAFSCPS 129

  Fly   137 HLEQTDKSEGNEAAREEDFFAQCDNEVDFNVQNNNVSKQDPNPPTVAPVISVETQQGGAPSVNLL 201
            ||:...:.:..|...|                :|...|..|.|..:.  ....|..|..| ....
Mouse   130 HLQSNIRRQIGEKTHE----------------HNQCGKAFPTPSHLQ--YHERTHTGEKP-YECH 175

  Fly   202 NSVVPAAVPSSI--------GARKVQPKKGGLGARKVGGLGATKVKTNFADIEARANAANEMKTS 258
            ......|:||.:        |.:..:..:.|....::..|...|                  :|.
Mouse   176 QCGKAFAIPSHLQYHERTHTGEKSYECHQCGKAFAQLSTLNRHK------------------RTH 222

  Fly   259 AAAAPVVKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTMDPAKAKQMERLGMGFNLRGSDM 323
            ....|....|..:           |:...|..|..:    :|....|:.:..:.|.||.||.|..
Mouse   223 TGEKPYECNQCGK-----------AFARRSSLKCHK----RTHTGEKSHECNQCGKGFALRSSFQ 272

  Fly   324 AHSAL 328
            .|..:
Mouse   273 CHKRI 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 23/113 (20%)
9030624G23RikNP_001369748.1 KRAB 45..85 CDD:396083 6/39 (15%)
C2H2 Zn finger 118..138 CDD:275368 3/19 (16%)
C2H2 Zn finger 147..166 CDD:275368 4/20 (20%)
zf-H2C2_2 158..182 CDD:404364 3/26 (12%)
C2H2 Zn finger 174..194 CDD:275368 3/19 (16%)
COG5048 198..571 CDD:227381 18/113 (16%)
C2H2 Zn finger 202..222 CDD:275368 3/37 (8%)
C2H2 Zn finger 230..250 CDD:275368 4/34 (12%)
C2H2 Zn finger 258..278 CDD:275368 7/20 (35%)
C2H2 Zn finger 286..306 CDD:275368
C2H2 Zn finger 314..334 CDD:275368
C2H2 Zn finger 342..362 CDD:275368
C2H2 Zn finger 370..390 CDD:275368
C2H2 Zn finger 398..418 CDD:275368
C2H2 Zn finger 426..446 CDD:275368
C2H2 Zn finger 454..474 CDD:275368
C2H2 Zn finger 482..502 CDD:275368
C2H2 Zn finger 510..529 CDD:275368
C2H2 Zn finger 538..558 CDD:275368
C2H2 Zn finger 566..586 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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