DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ArfGAP3 and SMAP2

DIOPT Version :10

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_073570.1 Gene:SMAP2 / 64744 HGNCID:25082 Length:429 Species:Homo sapiens


Alignment Length:445 Identity:107/445 - (24%)
Similarity:171/445 - (38%) Gaps:104/445 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GPSKQEI---ESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRS 68
            |.|.:::   ::|.:.|..:..||.|.||.:|.|.|:|...|:||||.|:.:|||||||::.|:|
Human     3 GKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKS 67

  Fly    69 TNLDTNWTWLQLRQMQLGGNANAAQFFRAHNCSTTDAQVKYNSRAAQLYRDKLCAQAQQAMKTHG 133
            .||| .||..|::.||..||..|.:.:.|: ...|..:.:.:.......|||...:.........
Human    68 VNLD-QWTQEQIQCMQEMGNGKANRLYEAY-LPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDI 130

  Fly   134 TKLHLEQTDK-SEGNEAAREEDFFAQCDNEVDFNVQNNNVSKQDP------NPPTVAPVISV--- 188
            .....|:.|| ..|:|...|:..     ..|.|........|:||      :|.:.|||:.:   
Human   131 NAFRKEKDDKWKRGSEPVPEKKL-----EPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVMDLLGL 190

  Fly   189 -----------ETQQGGAPSVNLLNSVVPAAVPSSIGARKV---QPKKGGLGA------------ 227
                       :|.......::||.| ||:  |||.|:|||   .|..|..|:            
Human   191 DAPVACSIANSKTSNTLEKDLDLLAS-VPS--PSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPG 252

  Fly   228 RKVGGLGATKVKTNFADIEARANAANEMKTSA---AAAPVVKPQTAEDELETVASMRLAYQELSM 289
            .|...:|..::..: :.:....:...:|.|.|   |.|.:..| ||......|            
Human   253 SKSEEIGKKQLSKD-SILSLYGSQTPQMPTQAMFMAPAQMAYP-TAYPSFPGV------------ 303

  Fly   290 QKTREEAKLKTMDPAKAKQMERLGMGFNLRGSDMAHSALGDME-----------TIQQ------- 336
              |...:.:.:|.|.....:.:.|....:....|....:|.|:           |.||       
Human   304 --TPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGM 366

  Fly   337 SAAPKAKLSLLESE----------------NFF--TDFSLYGNSSSGGGGGGSSE 373
            :|.|:....:..::                ||:  .....||.|.|||.|..:::
Human   367 AAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQ 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap_ArfGap2_3_like 12..127 CDD:350060 42/117 (36%)
SMAP2NP_073570.1 ArfGap_SMAP2 16..122 CDD:350083 41/107 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 138..184 12/50 (24%)
Interaction with clathrin heavy chains. /evidence=ECO:0000250 163..232 20/71 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..259 13/43 (30%)
Interaction with PICALM. /evidence=ECO:0000250 340..429 16/82 (20%)

Return to query results.
Submit another query.