DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and appl1

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_021335332.1 Gene:appl1 / 571540 ZFINID:ZDB-GENE-081016-1 Length:708 Species:Danio rerio


Alignment Length:415 Identity:84/415 - (20%)
Similarity:136/415 - (32%) Gaps:131/415 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 AQVKYNSRAAQLYRDKLCAQAQQAMKTHGTKLHLEQTDKSEGNEAAREEDFFAQCDNEV--DFNV 167
            ||:.:    .:|..:.|..|.:..:...||.:          ....||.|..|:...:.  |...
Zfish   206 AQISF----FKLGSENLTQQWEDFLTNIGTSV----------QNVRREMDSDAEAMEQTIQDLKE 256

  Fly   168 QNNNVSKQDPNPPTVAPVISVETQQGGAPSVNLLNSVVPAAVPSSIGARKVQPKKGG------LG 226
            .::.:...||:|..: ||....|::.|     .||:.....:.||...|:....:||      .|
Zfish   257 ASDPLYMPDPDPNRI-PVNRNLTRKAG-----YLNTRNKTGLVSSSWERQYFFTQGGNLMSQSRG 315

  Fly   227 ARKVGGL--GATKVKTNFADIEARANAANEMKTSAAAAPVVKPQTAEDELETVASMRLAYQELSM 289
            | ..|||  ..........|.|.|.............|.|::..:.:|..|.:|::....:.:.:
Zfish   316 A-VAGGLVMDIDNCSVMAVDCEDRRFCFQITAFDGKKAAVLQADSRKDCEEWIATINNISKRIYL 379

  Fly   290 QKTREE-------AKLKTMDPAKAKQMERLGMGFNLRGSDMAHSALGDMETIQQSAAPKAKLSLL 347
            .:..||       :.|:.:.|:.:.|...                    |:.:.:...|.|.   
Zfish   380 SENPEEIAARVNQSALEAVTPSPSFQQRH--------------------ESFRPNTQGKVKA--- 421

  Fly   348 ESENFFTDFSLYGNSSSGGGGGGSSEKRESSVGGTS-KLDKFELDAL-------GYETIEPIGGS 404
                          |.||.         :.|||..| .|....||:|       .::.|.|:...
Zfish   422 --------------SRSGS---------QCSVGSESPALSSLSLDSLVAPDTPIQFDIISPVSEE 463

  Fly   405 HSNITSMFSRSNDYDKPKTSAPVKKNSGSSQTHTKGGTSTDPVIAQQKFGNSKGFGSDQYFASEQ 469
            |::.|            |:||.              |..|:|      ||.|.|..|::   ||.
Zfish   464 HTSQT------------KSSAQ--------------GRRTNP------FGESGGSQSEE---SED 493

  Fly   470 SSADVSASLNRFQGS---RAISSSD 491
            |... ...:.||.||   :|..|||
Zfish   494 SILH-QLFIVRFLGSMEVKATESSD 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 3/15 (20%)
appl1XP_021335332.1 BAR_APPL1 20..234 CDD:153315 7/41 (17%)
BAR-PH_APPL 252..376 CDD:270067 28/130 (22%)
PTB_APPL 488..623 CDD:269980 12/34 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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