DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and Arfgap3

DIOPT Version :10

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_063120224.1 Gene:Arfgap3 / 503165 RGDID:1560066 Length:536 Species:Rattus norvegicus


Alignment Length:566 Identity:218/566 - (38%)
Similarity:300/566 - (53%) Gaps:74/566 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PSKQEIESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRSTNLD 72
            ||||:|.::|.|||:.|.||.||||.||.|:|:|::||:|:|||||..||:|||||:|:|||.||
  Rat     4 PSKQDILAIFKRLRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRSTELD 68

  Fly    73 TNWTWLQLRQMQLGGNANAAQFFRAHNCSTTDAQVKYNSRAAQLYRDKLCAQAQQAMKTHGTKLH 137
            :||:|.|||.||:||||||:.||..|.|:|.|...|||||||||||:|:...|.||.:.|||.|.
  Rat    69 SNWSWFQLRCMQVGGNANASSFFHQHGCATKDTNAKYNSRAAQLYREKIKTLATQATRRHGTDLW 133

  Fly   138 LEQTDKSEGNEAAREEDFFAQCDNEVDFNVQNNNVSKQDPNPPTVAP---VISVETQQGG---AP 196
            |:.......:...:||||||   :.....|.....:...|.|.:..|   ..:.|..:||   .|
  Rat   134 LDSCAAPPASPPPKEEDFFA---SHASLEVSGATQASAQPEPASSTPWGLETTPEKHEGGPGQGP 195

  Fly   197 SVNLLNS---VVPAAVPSSIGARKVQPKKGGLGARKVGGLGATKV-KTNFADIEARANAANEMKT 257
            ||..||:   ..||.|.|.|..:..|.|| ||||:| |.|||.|: .|:|.:||.:|.|.::.|.
  Rat   196 SVEGLNTPGKTAPAEVSSIIKKKPNQAKK-GLGAKK-GSLGAQKLTNTSFTEIEKQAQAVDKRKE 258

  Fly   258 SAAAAPVVKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTMDPAKAKQMERLGMGFNLRGSD 322
            ....|     :....|...|:|:||||::|.:.|.::| :|......|| :.|||||||......
  Rat   259 QEDLA-----RGTPKEESIVSSLRLAYKDLEIHKKQDE-RLNLSGQKKA-EAERLGMGFGSCRGG 316

  Fly   323 MAHSALGDMETIQQS----AAPKAKLSLLESENFFTDFSLYGNSSSGGGGGGSSEKRESSVGGTS 383
            ::||...||:||:|.    |.|:.|......:::|:..|.:...||                  |
  Rat   317 ISHSVTSDMQTIEQESPTLAKPRRKYQEDPEDSYFSSSSKWSEQSS------------------S 363

  Fly   384 KL--DKFELDALGYETIEPIGGSHSNITSMFSRSNDY---DKPKTSAPVKKNSGSS-QTHTKGGT 442
            :.  |..||.:             |:.:|....::.|   |..:...|..|::||| :..::...
  Rat   364 RYFDDPMELRS-------------SHFSSWDDSADSYWKKDSSRDPEPATKSTGSSDRPSSRRKP 415

  Fly   443 STDPV----IAQQKFGNSKGFGSDQYFA-SEQSSADVSASLNRFQGSRAISSSDYFGDGSPGGTG 502
            ..:||    .||:||||.|...||.||. ..|:..:..|.|.|...|.:|||:|.|.:.....||
  Rat   416 EYEPVGNTDEAQKKFGNVKAISSDMYFGIQSQTDFETRARLERLSTSSSISSADLFDEQRKQTTG 480

  Fly   503 GNRASSVNFSAPDLDVESVKESVRQGVHKVAGRLSNLANDVMTSWQ 548
            ....|:|..:|||:      ...:|||..|||:||..||.||||.|
  Rat   481 NYNLSNVLPNAPDM------AQFKQGVRSVAGKLSVFANGVMTSIQ 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap_ArfGap2_3_like 12..127 CDD:350060 71/114 (62%)
Arfgap3XP_063120224.1 None

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