DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and Agfg1

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001129068.1 Gene:Agfg1 / 363266 RGDID:1560041 Length:561 Species:Rattus norvegicus


Alignment Length:613 Identity:129/613 - (21%)
Similarity:205/613 - (33%) Gaps:163/613 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AAGPSKQEIESVFSRLR---AQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLG-VHLTF 65
            ||...:::.|.....||   ..|.|:.||||..:.||:.::|.|.|:|..||...|.|. .|.  
  Rat     2 AASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHR-- 64

  Fly    66 VRSTNLDTNWTWLQLRQMQLGGN--------------ANAAQFFRAHNCSTTDAQVKYNSR---- 112
            |:|.:: |.:|..::..:|..||              ::|...||.........|.||..:    
  Rat    65 VKSISM-TTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYV 128

  Fly   113 -------AAQLYRDKLCAQAQQAMKTHGTK------------LHLEQ--------TDKSEGNEAA 150
                   .|.::.....:.|.....|...|            |||.:        ..:|:|.:..
  Rat   129 PPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGESAPALHLNKGTPTQSPVVGRSQGQQQE 193

  Fly   151 REE---------DFFA-------QCDNEVDFNVQNNNVSKQDPNPPTVAPVISVETQQGGAPSVN 199
            :::         |.||       ...|..:|...|::.::...|    |...:.:.....:.|.|
  Rat   194 KKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSAN----AEFANFDAFGQSSGSSN 254

  Fly   200 LLNSVVPAAVPSSIGARKVQPKKGGLGARKVGGLGATKVKTNFADIEARANAANEMKTSAAAAPV 264
            .  ...|.|..|..     ||:..|      |..|:  |..|||..:      |..|:|:|....
  Rat   255 F--GGFPTASHSPF-----QPQTTG------GSAGS--VNANFAHFD------NFPKSSSADFGS 298

  Fly   265 VKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTMDPA-KAKQMERLGMGFNLRG-------- 320
            .....:.....||:  :::..:..:|...:.|.|..:|.. .|.|....|.||...|        
  Rat   299 FSTSQSHQTASTVS--KVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSVV 361

  Fly   321 --------SDMAHSALGDMETIQQSAAPKAKLSLLESENFFTDFSLYGNSSSGGGG----GGSSE 373
                    |...::||.:::::..|||        .|.|.:|..|   |:||...|    |.|.:
  Rat   362 SVPSHSSASSDKYAALAELDSVFSSAA--------TSNNAYTSTS---NASSSVFGTVPVGASPQ 415

  Fly   374 KRESSVG--------------------GTSKLDKFELDALGYETIEPIGGSHSNITSMFSRSNDY 418
            .:.:|.|                    ..|..:.|:.:|.| .|....|.:..::.:.|.....|
  Rat   416 TQPASSGPAPFGATPSTNPFVAATGPSAASSTNPFQTNARG-ATAATFGTASMSMPAGFGTPAQY 479

  Fly   419 DKPKTSAPVKKNSGSSQTHTKGGTSTDPVIAQQKFGNSKGFGSDQYFASEQSSADVSASLNRF-Q 482
            ..|              |...|.....|..||..|.....|......|...:.......:..| |
  Rat   480 SLP--------------TSFSGSFQQPPFPAQAAFPQQTAFSQQPNGAGFATFGQTKPVVTPFGQ 530

  Fly   483 GSRAISSSDYFGDGSPGGTGGNRASSVN 510
            .:.|..||:.|..|:|.|.....:||.|
  Rat   531 VAAAGVSSNPFMTGAPTGQFPTGSSSTN 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 33/132 (25%)
Agfg1NP_001129068.1 COG5347 8..309 CDD:227651 68/328 (21%)
ArfGap 14..135 CDD:214518 32/123 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..193 5/21 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 409..451 5/41 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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