DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and Asap

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001014504.1 Gene:Asap / 35783 FlyBaseID:FBgn0050372 Length:1155 Species:Drosophila melanogaster


Alignment Length:635 Identity:134/635 - (21%)
Similarity:204/635 - (32%) Gaps:177/635 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASPAAGPSKQEIE-SVFSRLRAQPANKSCFDCAAKAP-TWSSVTYGIFICIDCSAVHRNLGVHLT 64
            |:|...||..|:: :|...::..|.|..|.||.::.. ||.|:.:||.:||.||.|||:||||.:
  Fly   414 ANPQMSPSLVELQKTVIRYVQLLPGNDRCCDCGSRNDVTWISLNFGILVCIQCSGVHRDLGVHHS 478

  Fly    65 FVRSTNLDTNWTWLQLRQMQLGGNANAAQFFRA--------HNCSTTD----AQVKYNSRAAQLY 117
            .::|..|| |.|...|...:..||:.......|        |..|..:    .:.||   .|:.|
  Fly   479 RIQSLTLD-NLTTANLLIARAMGNSTLNDIMEAKLGRGKLQHESSMEERYDFIRAKY---VAKRY 539

  Fly   118 RDKLCAQAQQAMKTHGTKLHLEQT-----------------------DKSEGNEAAREEDFFAQC 159
            ..:.|:.      .:..:..|||.                       ..|:..|.|.......:.
  Fly   540 VMRTCSD------DNDLRCDLEQAVVNADMSQLLQVWAEGADLTCCLPSSDAGETALHLAVLREM 598

  Fly   160 DNE---VDFNVQN---NNVSKQDPNPPTVAPVISVETQ-----------------QGGAPSVNLL 201
            .:.   |||.:||   ..::|. .||..:..|....|.                 :.|| ...|.
  Fly   599 GSTLHIVDFLIQNMPPKGLNKA-TNPAGLLDVTGKNTALHLCALHDRRECMKLLLRSGA-DYELK 661

  Fly   202 NSVVPAAVPSSIGARKVQPKKGGLGARKVGGLGATKVKTNFADIEARANAANEMKTSAAAAPVVK 266
            ||....|:       .:..:.|....|::......:.|:.|..|....|..||           .
  Fly   662 NSQNKTAL-------DIAKEMGHNSCRELIECAIKREKSAFDHINTDWNLPNE-----------D 708

  Fly   267 PQTAEDELETVASMRLAYQELSMQKTREEAKLKTMDPAKAKQMERLGMGFNLRGSD--MAHSALG 329
            ..|...:.|||.               :|.|.::..|:.|             |.|  :..|...
  Fly   709 GSTDFSDDETVI---------------DERKSRSRPPSFA-------------GGDSPVLRSRSS 745

  Fly   330 DMETIQQSAAPKAKLSLLESENFFTDFSL--------------------------YGNSSSGGGG 368
            ..::||.|::|.|.   ..|..|.....|                          .|.:..|.||
  Fly   746 TCDSIQSSSSPIAN---CPSRQFTLPSGLPSYTHSAGTSPKQHISVGQYLGSATNVGGNGPGNGG 807

  Fly   369 GGSSEKRESSVGGTSKLDKFELDALGYETIEPIGGSHSNITSMFSRSNDYDKPKTSAPVKKNSGS 433
            ...|.....||.........:.|..|:.|    |...|..|   :..|...|....||.....||
  Fly   808 SSPSSASSQSVRAARNSLNMQSDLGGHVT----GARKSTST---ANMNSLKKRTAPAPPPGTLGS 865

  Fly   434 SQTHTKGGTSTDPVIAQQKFGNSKGFGSDQYFASEQSSADVSASLNRFQGSRAISSSDYFGDG-- 496
            :.:.:..||...|.      .:|:.|.:....|....:..:..:.......|::.||...|.|  
  Fly   866 ASSSSFYGTLPHPP------RHSQNFDASDIRAINHKNQSLDVAYGTLPHLRSVESSPRGGGGYG 924

  Fly   497 -----SPGGTGGNRASSVNFSAPDLDVESVK-----ESVRQGVHKVAGRL 536
                 .|||:|.   .|.|...|.:.....|     ||:.:.:|....:|
  Fly   925 YGVSQDPGGSGN---GSNNSLMPAMTTFGHKRSPSGESLNRNIHLAGAKL 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 36/116 (31%)
AsapNP_001014504.1 BAR_ASAPs 35..249 CDD:153288
PH_ASAP 302..410 CDD:270071
ArfGap_ASAP 425..541 CDD:350063 37/119 (31%)
Ank_2 554..662 CDD:403870 19/109 (17%)
ANK repeat 586..622 CDD:293786 8/36 (22%)
ANK repeat 624..662 CDD:293786 5/38 (13%)
Ank_2 636..>693 CDD:403870 8/64 (13%)
SH3_ASAP 1095..1149 CDD:212755
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464132
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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