DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and Arfgap1

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001361599.1 Gene:Arfgap1 / 228998 MGIID:2183559 Length:424 Species:Mus musculus


Alignment Length:541 Identity:131/541 - (24%)
Similarity:193/541 - (35%) Gaps:156/541 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASPAAGPSKQEIESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTF 65
            ||||       ....|...:|||..|..||:|.|..|.|.||||||:||::||..||.|||||:|
Mouse     1 MASP-------RTRKVLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSF 58

  Fly    66 VRSTNLDTNWTWLQLRQMQLGGNANAAQFFRAHNC--STTDAQVKYNSRAAQLYRDKLCAQAQQA 128
            |||..:| .|..::|.:|:.||||...:|....:.  .:...|.||:||||.|:|||:...|   
Mouse    59 VRSVTMD-KWKDIELEKMKAGGNAKFREFLETQDDYEPSWSLQDKYSSRAAALFRDKVATLA--- 119

  Fly   129 MKTHGTKLHLEQTDKSEGNEAAREEDFFAQCDNEVDFNVQNNNVSKQDPNPPTV---APVISVET 190
                            ||.|.:.|..           ..||    ...|.|.|:   |...|.:.
Mouse   120 ----------------EGKEWSLESS-----------PAQN----WTPPQPKTLQFTAHRASGQP 153

  Fly   191 QQGGAPSVNLLNSVVPAAVPSSIGARKVQPKKGGLGARKVGGLGATKVKTNFADIEARANAANEM 255
            |...|.........:...:.|..||::          .:..|.|.|                   
Mouse   154 QSAAASGDKAFEDWLNDDLGSYQGAQE----------NRYVGFGNT------------------- 189

  Fly   256 KTSAAAAPVVKPQTAEDEL--ETVASMRLAYQELSMQKTREEAKLKTMDPAKAKQMERLGMGFNL 318
                     |.||..||:.  ..::|:...:...:...::..:..|........|..:...|:..
Mouse   190 ---------VPPQKREDDFLNNAMSSLYSGWSSFTTGASKFASAAKEGATKFGSQASQKFWGYKQ 245

  Fly   319 R---GSDMAHSALGDMETIQQSAAPKAKLSLLESENFFTDFSLYGNSSSGGGGGGSSEKRESSVG 380
            :   .|::.||.   .|.:.:.|..|.|     ....|.|.|           .|.|:......|
Mouse   246 QSEPASELGHSL---NENVLKPAQEKVK-----EGRIFDDVS-----------SGVSQLASKVQG 291

  Fly   381 GTSKLDKFELDALGYETIEPIGGSHSNITSMFS--RSNDYDKPKTSAPVKKNSGSSQTHTKGGTS 443
            ..||         |:.          ::|:.||  ..:..|:|.        .|.|..::.|..|
Mouse   292 VGSK---------GWR----------DVTTFFSGKAEDSSDRPL--------EGHSYQNSSGDNS 329

  Fly   444 TDPVIAQQKFGNSKGFGSDQYFASEQSSADVSASLNRFQGSRAISSSDYFGDGS----------- 497
            .:..| .|.|..:  |||.:...::..|:|.....:...|.|:..|.|.:|.||           
Mouse   330 QNSNI-DQSFWET--FGSAEPPKAKSPSSDSWTCADASTGRRSSDSWDVWGSGSASNNKNSNSDG 391

  Fly   498 ----PGGTGGNRASSVNFSAP 514
                .|.:|..||.:...:||
Mouse   392 WESWEGASGEGRAKATKKAAP 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 50/105 (48%)
Arfgap1NP_001361599.1 ArfGap_ArfGap1 6..121 CDD:350059 53/134 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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