DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and K02B12.7

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_492310.1 Gene:K02B12.7 / 172643 WormBaseID:WBGene00010500 Length:423 Species:Caenorhabditis elegans


Alignment Length:511 Identity:131/511 - (25%)
Similarity:203/511 - (39%) Gaps:154/511 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASPAAGPSKQEIESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTF 65
            ||||       ....|...||....|..||:|.|..|.|.||:|||:||::||.:||:|||||:|
 Worm     1 MASP-------RTRRVLKELRPCDDNNFCFECEANNPQWVSVSYGIWICLECSGIHRSLGVHLSF 58

  Fly    66 VRSTNLDTNWTWLQLRQMQLGGNANAAQFFRAHNCSTTD------AQVKYNSRAAQLYRDKLCAQ 124
            |||..:| .|..::|.:|:.|||...|:|.:    |..|      .|.|||||||.|:|||:..:
 Worm    59 VRSVTMD-KWKDIELAKMKAGGNRKFAEFLQ----SQPDYKEKWTIQEKYNSRAAALFRDKVACE 118

  Fly   125 AQQAMKTHGTKLHLEQTDKSEGNEAAREEDFFAQCDNEVDFNVQNNNVSKQDPNPPTVAPVISVE 189
            |                   ||.|.::.....|            |.|      |||:.. :|.:
 Worm   119 A-------------------EGREWSQSTSPAA------------NYV------PPTLGG-MSSQ 145

  Fly   190 TQQGGAPSVNLLNSVVPAAVPSSIGARKVQPKKGGLGA-------RKVGGLGATKVKTNFADIEA 247
            ::.....|.|       :::.|..|......:..|.||       .|..|.|.|....|      
 Worm   146 SKPTNKSSGN-------SSLGSYYGGNSSYSQSTGDGAYSTQDSNSKYQGFGNTGYVPN------ 197

  Fly   248 RANAANEMKTSAAAAPVVKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTMD---PAKAKQM 309
            ::|:.:::...|                 ::.:.:.:..||...::..|..|.:.   ..||.|:
 Worm   198 QSNSGDDLLAGA-----------------MSGLSMGWSMLSKGASQAAAMAKDVGIQAQQKASQL 245

  Fly   310 -ERLGMGFNLRG------SDMAHSALGDMETIQQSAAPKAKLSLLESENFFTDFSLYGNSSSGGG 367
             |.:....:|.|      |::...:...:.:..:|.:..|...:| ::..:.||        |||
 Worm   246 SENVSQNNSLFGGVANKASEVGTKSWDGLSSFVKSPSLNAFSGIL-AKTGYEDF--------GGG 301

  Fly   368 GGGSSEKRESSVGGTSKLDKF----ELDALGYETIEPIGGSHSNITSMFSRSNDYDKPKTSAPVK 428
            |||.|        |:|..::|    :...|...|.|  ||.|        .||:..||  :.|| 
 Worm   302 GGGMS--------GSSSQNEFNDWLKQSNLPRGTTE--GGDH--------LSNEELKP--TEPV- 345

  Fly   429 KNSGSSQTHTKGGTSTDPVIAQQKFGNSKGFGSDQYFASEQSSADVSASLNRFQGS 484
                  :|..|...|..||.:::|           ..|......|.|:::.:|:.|
 Worm   346 ------ETKKKKERSVKPVQSKEK-----------VTAENVEDDDSSSTITQFESS 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 51/109 (47%)
K02B12.7NP_492310.1 ArfGap_ArfGap1 6..121 CDD:350059 54/138 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1155557at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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