DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ArfGAP3 and Agfg1

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_006496493.1 Gene:Agfg1 / 15463 MGIID:1333754 Length:577 Species:Mus musculus


Alignment Length:625 Identity:133/625 - (21%)
Similarity:211/625 - (33%) Gaps:171/625 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AAGPSKQEIESVFSRLR---AQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLG-VHLTF 65
            ||...:::.|.....||   ..|.|:.||||..:.||:.::|.|.|:|..||...|.|. .|.  
Mouse     2 AASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHR-- 64

  Fly    66 VRSTNLDTNWTWLQLRQMQLGGN--------------ANAAQFFRAHNCSTTDAQVKYNSR---- 112
            |:|.:: |.:|..::..:|..||              ::|...||.........|.||..:    
Mouse    65 VKSISM-TTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYV 128

  Fly   113 -------AAQLYRDKLCAQAQQAMKTHGTK------------LHLEQ--------TDKSEGNEAA 150
                   .|.::.....:.|.....|...|            |||.:        ..:|:|.:..
Mouse   129 PPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGESAPALHLNKGTPSQSPVVGRSQGQQQE 193

  Fly   151 REE---------DFFA-------QCDNEVDFNVQNNNVSKQDPNPPTVAPVISVETQQGGAPSVN 199
            :::         |.||       ...|..:|...|::.::...|    |...:.:.....:.|.|
Mouse   194 KKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSAN----ADFANFDAFGQSSGSSN 254

  Fly   200 LLNSVVPAAVPSSIGARKVQPKKGGLGARKVGGLGATKVKTNFADIEARANAANEMKTSAAAAPV 264
            .  ...|.|..||.     ||:..|      |..|:  |..|||..:      |..|:|:|....
Mouse   255 F--GGFPTASHSSF-----QPQTTG------GSAGS--VNANFAHFD------NFPKSSSADFGT 298

  Fly   265 VKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTMDPA-KAKQMERLGMGFNLRG-------- 320
            .....:.....||:  :::..:..:|...:.|.|..:|.. .|.|....|.||...|        
Mouse   299 FSTSQSHQTASTVS--KVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSVV 361

  Fly   321 --------SDMAHSALGDMETIQQSAAPKAKLSLLESENFFTDFSLYGNSSSGGGG----GGSSE 373
                    |...::||.:::::..|||        .|.|.:|..|   |:||...|    |.|::
Mouse   362 SVPSHSSASSDKYAALAELDSVFSSAA--------TSSNAYTPTS---NASSSVFGTVPVGASAQ 415

  Fly   374 KRESSVG--------------------GTSKLDKFELDALGYETIEPIGGSHSNI---------- 408
            .:.:|.|                    ..|..:.|:.:|.|...:.  |..||.:          
Mouse   416 TQPASSGPAPFGATPSTNPFVAATGPSAASSTNPFQTNARGATGLS--GAMHSQVFPHAHFAATF 478

  Fly   409 -TSMFSRSNDYDKPKTSAPVKKNSGSSQTHTKGGTSTDPVI-AQQKFGNSKGFGSDQYFASEQSS 471
             |:..|....:..|...:.....|||.|         .|.. ||..|.....|......|...:.
Mouse   479 GTASMSMPAGFGTPAQYSLPTSFSGSFQ---------QPAFPAQAAFPQQTAFSQQPNGAGFATF 534

  Fly   472 ADVSASLNRF-QGSRAISSSDYFGDGSPGGTGGNRASSVN 510
            ......:..| |.:.|..||:.|..|:|.|.....:||.|
Mouse   535 GQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQLPTGSSSTN 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 33/132 (25%)
Agfg1XP_006496493.1 COG5347 8..268 CDD:227651 56/273 (21%)
ArfGap_AGFG1 13..128 CDD:350082 32/117 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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