DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ArfGAP3 and Asap1

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_006520455.1 Gene:Asap1 / 13196 MGIID:1342335 Length:1223 Species:Mus musculus


Alignment Length:560 Identity:123/560 - (21%)
Similarity:189/560 - (33%) Gaps:192/560 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SKQEIESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRSTNLDT 73
            :|..||.| .||   |.|..|.||.:..|||.|...||..||:||.:||.:|||::.::|..||.
Mouse   529 TKAIIEDV-QRL---PGNDICCDCGSSEPTWLSTNLGILTCIECSGIHREMGVHISRIQSLELDK 589

  Fly    74 NWTWLQLRQMQLGGN-------AN---------------------AAQF----FRAHNCSTTDAQ 106
            ..|...|....:|.|       ||                     .|::    |....|:::.|:
Mouse   590 LGTSELLLAKNVGNNSFNDIMEANLPSPSPKPTPSSDMTVRKEYITAKYVDHRFSRKTCASSSAK 654

  Fly   107 VKYNSRAAQLYRDKLC-----AQAQQAM--------KTHGTKLHLEQTDKSEGNEAAREEDFFAQ 158
            :.....|.: .||.|.     |:..:.|        :...|.|||          |.|..|..:.
Mouse   655 LNELLEAIK-SRDLLALIQVYAEGVELMEPLLEPGQELGETALHL----------AVRTADQTSL 708

  Fly   159 CDNEVDFNVQN-NNVSKQDPNPPTVAPVIS-------VETQQGGAPSVNLLNSVVPAAVPSSIGA 215
              :.|||.||| .|:.||.....||....|       ::......|:|:::|.....|:      
Mouse   709 --HLVDFLVQNCGNLDKQTSVGNTVLHYCSMYGKPECLKLLLRSKPTVDIVNQNGETAL------ 765

  Fly   216 RKVQPKKGGLGARKVGGLGATKVKTNFADIEARANAANEMKTSAAAAPVVKPQTAEDELETVAS- 279
                                        ||..|                :|....||.|....| 
Mouse   766 ----------------------------DIAKR----------------LKATQCEDLLSQAKSG 786

  Fly   280 -----MRLAYQELSMQKTREEAKLKTMDPAKAKQMERLGMGFNLRGSDMAHSALGDMETIQQSAA 339
                 :.:.|:....|...:|:.....|.....:.||     :.|.....||:         |.:
Mouse   787 KFNPHVHVEYEWNLRQDEMDESDDDLDDKPSPIKKER-----SPRPQSFCHSS---------SIS 837

  Fly   340 PKAKLSL----------LESENFFTDFSLYGNSSSGGGGGGSSE-----KRESSVGGTSKLDKFE 389
            |:.||:|          ..|...||: .::.::|:......:||     .|.:..|.|       
Mouse   838 PQDKLALPGFSTPRDKQRLSYGAFTN-QIFASTSTDLPTSPTSEAPPLPPRNAGKGPT------- 894

  Fly   390 LDALGYETIEPIGGSHSNITSMFSRSNDYDKPKTSAPVKKNSGSSQTHTKGGTSTDPVIAQQKFG 454
                |..:..|:|...|:.:|..|:.    :|....|..|.           |.:||........
Mouse   895 ----GPPSTLPLGTQTSSGSSTLSKK----RPPPPPPGHKR-----------TLSDPPSPLPHGP 940

  Fly   455 NSKG---FGSDQYFASEQSSADVSASLNRFQG-SRAISSS 490
            .:||   :|:|....|...:|      |:|:| |:..|:|
Mouse   941 PNKGAIPWGNDVGPLSSSKTA------NKFEGLSQQASTS 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 38/135 (28%)
Asap1XP_006520455.1 BAR_ASAP1 138..344 CDD:153325
PH_ASAP 407..513 CDD:270071
ArfGap_ASAP1 528..649 CDD:350073 37/123 (30%)
ANK repeat 692..725 CDD:293786 15/44 (34%)
Ank_2 696..>768 CDD:372319 23/117 (20%)
ANK repeat 727..758 CDD:293786 5/30 (17%)
Atrophin-1 845..>1109 CDD:367360 33/163 (20%)
SH3_ASAP1 1165..1221 CDD:212898
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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