DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and AGAP1

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_006712302.2 Gene:AGAP1 / 116987 HGNCID:16922 Length:1151 Species:Homo sapiens


Alignment Length:163 Identity:46/163 - (28%)
Similarity:67/163 - (41%) Gaps:37/163 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRSTNLDTNWTWLQLRQMQ 84
            :|....|..|.||..:.|.|:|:..|..:||:||.:|||||.||:.|||.:|| :|....::.|.
Human   909 IRNMRGNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLD-DWPVELIKVMS 972

  Fly    85 LGGNANAAQFFRAHNCSTTDAQV-------------KYNSR---------AAQLYRDKLCAQAQQ 127
            ..||..|...:...:...|...|             ||..:         ...|.:..|.|.|.:
Human   973 SIGNELANSVWEESSQGRTKPSVDSTREEKERWIRAKYEQKLFLAPLPCTELSLGQHLLRATADE 1037

  Fly   128 AMKT------HGTKLHLEQTDKSEGNEAAREED 154
            .::|      ||:        :.|.||...|.|
Human  1038 DLRTAILLLAHGS--------RDEVNETCGEGD 1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 35/122 (29%)
AGAP1XP_006712302.2 Centaurin_gamma 337..498 CDD:133303
RAS 338..504 CDD:214541
PH_AGAP 613..886 CDD:241281
PH 616..>680 CDD:278594
PH <830..881 CDD:278594
ArfGap 905..1019 CDD:279720 34/110 (31%)
Ank_2 1030..1120 CDD:289560 11/41 (27%)
ANK 1030..>1119 CDD:238125 11/41 (27%)
ANK repeat 1062..1093 CDD:293786 1/1 (100%)
ANK repeat 1095..1120 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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