DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and agap2

DIOPT Version :10

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_002933734.3 Gene:agap2 / 100496997 XenbaseID:XB-GENE-1011294 Length:2037 Species:Xenopus tropicalis


Alignment Length:56 Identity:29/56 - (51%)
Similarity:37/56 - (66%) Gaps:1/56 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRSTNLDTNW 75
            :|....|..|.||.|..|||:|:..|..|||:||.:|||||.||:.|||.:|| :|
 Frog  1794 IRNAKGNSFCVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLD-DW 1848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap_ArfGap2_3_like 12..127 CDD:350060 29/56 (52%)
agap2XP_002933734.3 PHA03247 <111..662 CDD:223021
PHA03247 <470..878 CDD:223021
Centaurin_gamma 1297..1454 CDD:133303
PH_AGAP 1559..1771 CDD:241281
ArfGap_AGAP 1789..1896 CDD:350065 29/56 (52%)
ANKYR <1915..>2004 CDD:440430
ANK repeat 1915..1945 CDD:293786
ANK repeat 1947..1978 CDD:293786
ANK repeat 1980..2005 CDD:293786
Blue background indicates that the domain is not in the aligned region.

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