DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP3 and zgc:162872

DIOPT Version :9

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_009290262.1 Gene:zgc:162872 / 100004931 ZFINID:ZDB-GENE-081022-1 Length:701 Species:Danio rerio


Alignment Length:353 Identity:77/353 - (21%)
Similarity:129/353 - (36%) Gaps:102/353 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 NKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRSTNLDTNWTWLQLRQMQLGGNAN 90
            |:.|.||....|.|:||..||.:||:||.:||:|||||:.|||..|| :|...||:.:.:.||..
Zfish   400 NQHCCDCGEAEPRWASVNLGITMCIECSGIHRSLGVHLSKVRSLTLD-SWEPEQLKLLCVLGNEV 463

  Fly    91 AAQFFRAHNCSTTDAQVKYNSRAAQLYRDKLCAQAQQAMKTHGTKLHLEQTDKSEGNEAAREEDF 155
            ....:..   ...|...|.::.:.:  :||......:.::......||:..|.......||:..:
Zfish   464 INGIYER---EAADGLQKPSAGSPR--QDKEQWIRSKYVEKRFVARHLDGPDADALKLRARKRLY 523

  Fly   156 FAQCDNEV-----------DFNVQNNNVSKQDPNPPTVAPVISVETQQGGAPSVNLLNSVVPAAV 209
            .|....::           :.|..||.                   |:|       ..:::.:|:
Zfish   524 SASVSGDLVAMAESLAEGAEINWNNNE-------------------QEG-------RTALIGSAI 562

  Fly   210 PSSIGARKVQPKKG-GLGARKVGGLGATKVKTNFAD-------IEARAN--AANEMKTSAAAAPV 264
            ..|:.|.:...:.| .:..|...|.||......:..       ::..||  ||:|......:..:
Zfish   563 GGSLLACEFLLQNGANVNHRDQRGQGALHAAATYGHTGQVCLLLKRGANQYAADEKGNDPLSIAI 627

  Fly   265 VKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTMDPAKAKQMERLGMGFNLRGSDMAHSALG 329
               :||..::.|:         |.|.:..||                      :|.|:....::|
Zfish   628 ---ETAHADIVTL---------LRMARMNEE----------------------MRDSEGFFGSVG 658

  Fly   330 DMETIQQSAAPKAKLSLLESENFFTDFS 357
            |.||.|               :.|.|||
Zfish   659 DDETFQ---------------DIFRDFS 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap 17..121 CDD:214518 34/94 (36%)
zgc:162872XP_009290262.1 BAR_ACAPs 18..217 CDD:153287
PH 265..357 CDD:278594
PH_ACAP 266..362 CDD:270070
ArfGap 399..504 CDD:279720 35/109 (32%)
Ank_2 <508..583 CDD:289560 13/100 (13%)
ANK 522..638 CDD:238125 22/153 (14%)
ANK repeat 552..583 CDD:293786 5/37 (14%)
Ank_2 557..649 CDD:289560 20/125 (16%)
ANK repeat 585..616 CDD:293786 6/30 (20%)
ANK repeat 618..649 CDD:293786 7/64 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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