DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ArfGAP3 and zgc:162872

DIOPT Version :10

Sequence 1:NP_001097664.2 Gene:ArfGAP3 / 40487 FlyBaseID:FBgn0037182 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_009290262.2 Gene:zgc:162872 / 100004931 ZFINID:ZDB-GENE-081022-1 Length:701 Species:Danio rerio


Alignment Length:353 Identity:77/353 - (21%)
Similarity:125/353 - (35%) Gaps:102/353 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 NKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRSTNLDTNWTWLQLRQMQLGGNAN 90
            |:.|.||....|.|:||..||.:||:||.:||:|||||:.|||..|| :|...||:.:.:.||..
Zfish   400 NQHCCDCGEAEPRWASVNLGITMCIECSGIHRSLGVHLSKVRSLTLD-SWEPEQLKLLCVLGNEV 463

  Fly    91 AAQFFRAHNCSTTDAQVKYNSRAAQLYRDKLCAQAQQAMKTHGTKLHLEQTDKSEGNEAAREEDF 155
            ....:...     .|.|.....|....:||......:.::......|.:..|.......||:..:
Zfish   464 INGIYERE-----AADVLQKPSAGSPRQDKEQWIRSKYVEKRFVARHPDGPDADALKLRARQRLY 523

  Fly   156 FAQCDNEV-----------DFNVQNNNVSKQDPNPPTVAPVISVETQQGGAPSVNLLNSVVPAAV 209
            .|....::           :.|..||.                   |:|       ..:::.:|:
Zfish   524 SASVSGDLVAMAEALAEGAEINWNNNE-------------------QEG-------RTALIGSAI 562

  Fly   210 PSSIGARKVQPKKG-GLGARKVGGLGATKVKTNFAD-------IEARAN--AANEMKTSAAAAPV 264
            ..|:.|.:...:.| .:..|...|.||......:..       ::..||  ||:|......:..:
Zfish   563 GGSLLACEFLLQNGANVNHRDQRGQGALHAAATYGHTGQVCLLLKRGANQYAADEKGNDPLSIAI 627

  Fly   265 VKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTMDPAKAKQMERLGMGFNLRGSDMAHSALG 329
               :||..::.|:         |.|.:..||                      :|.|:....::|
Zfish   628 ---ETAHADIVTL---------LRMARMNEE----------------------MRDSEGFFGSVG 658

  Fly   330 DMETIQQSAAPKAKLSLLESENFFTDFS 357
            |.||.|               :.|.|||
Zfish   659 DDETFQ---------------DIFRDFS 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP3NP_001097664.2 ArfGap_ArfGap2_3_like 12..127 CDD:350060 36/100 (36%)
zgc:162872XP_009290262.2 None

Return to query results.
Submit another query.