DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhbp6 and CG14258

DIOPT Version :10

Sequence 1:NP_001014600.1 Gene:Jhbp6 / 40479 FlyBaseID:FBgn0037174 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_651531.1 Gene:CG14258 / 43260 FlyBaseID:FBgn0039482 Length:258 Species:Drosophila melanogaster


Alignment Length:255 Identity:83/255 - (32%)
Similarity:140/255 - (54%) Gaps:9/255 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IVLLVTFTTCLVRAEDG--FLKEPPDYIKECRIADKDFVNCSTHSIQQLFDKLNDGIPGLTSIRS 69
            :...::....|:.|.:|  :|.|.||::..|.:.|.:|..|.|.:.|..|.:..|||||..::.|
  Fly     5 VAKFLSIVAVLLSAVEGAKYLAEKPDFLIPCIVGDPNFNVCLTKNFQSFFRQWKDGIPGYNAVGS 69

  Fly    70 FDPFYLNRIRITQGNSNAINLKVELANVKIIGFGHTNVLDSQVFKKDYSWKTTFTLPEMKLQADY 134
            |||||:.|::.||..|.:|.:..:|..|.:.|.|...||:|......|..:|..::|:::...||
  Fly    70 FDPFYIKRVKFTQDASRSIAINADLKEVYVAGAGQALVLESSWDPNHYVARTLISVPKLRFNFDY 134

  Fly   135 SLFGRILLIPLNGKGQVFLDAENMTVTMHTKTR-LYSKGGFTFYNVTNLHVDFKMDGLKSY---F 195
            .:.|.:..:.|||.|:.:.:|||..:.:....: |.:..|: |.:|.::.|:|:  .:|.:   .
  Fly   135 KVKGHVSALNLNGHGKGYFEAENALLLLELAVKPLATSDGY-FADVQSVKVNFR--EIKQFRIKL 196

  Fly   196 SNLFNGNKQLEDSTNKFFNDNWRMLADALYTVITQTIEDILLDVLKKIFHFIPANFFVSD 255
            .|||.|||.|||:.:..||:|||...:.|...:.||:..:|||..||.|.::||.:.:.|
  Fly   197 ENLFGGNKDLEDTAHILFNENWRDFFEVLRPAVEQTVGGVLLDRFKKTFVYVPATYLIKD 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp6NP_001014600.1 JHBP 8..253 CDD:461956 82/250 (33%)
CG14258NP_651531.1 JHBP 26..255 CDD:214779 78/231 (34%)

Return to query results.
Submit another query.