DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp6 and Jhbp3

DIOPT Version :10

Sequence 1:NP_001014600.1 Gene:Jhbp6 / 40479 FlyBaseID:FBgn0037174 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_649507.1 Gene:Jhbp3 / 40611 FlyBaseID:FBgn0037288 Length:246 Species:Drosophila melanogaster


Alignment Length:256 Identity:60/256 - (23%)
Similarity:104/256 - (40%) Gaps:16/256 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RLELIV--LLVTFTTCLVRAEDGFLKEPPDYIKECRIADKDFVNCSTHSIQQLFDKLNDGIPGLT 65
            :.:|||  ||:.|..|:...      ..||||:.|...|.:...|...|:..|...|..||..| 
  Fly     2 QFQLIVASLLICFVACISAG------NMPDYIQVCHRNDPELSKCLKSSVHNLRPYLAKGIKEL- 59

  Fly    66 SIRSFDPFYLNRIRITQGNSNAINLKVELANVKIIGFGHTNVLDSQVFKKDYSWKTTFTLPEMKL 130
            ::...:|.|:..:.|..|::   .|.|:...:.|:|..:..:...:...::..:.....||.:..
  Fly    60 NVPPLEPLYIGDLSILDGSA---GLTVKAKKLNILGASNFEITKLRASTQNRRFDFELILPHLHG 121

  Fly   131 QADYSLFGRILLIPLNGKGQVFLDAENMTVTMHTKTRLYSKGGFTFYNVTNLHVDFKMDGLKSYF 195
            ...|.:.|.||.:|:.|.|....:..|....:..:..:.|.....:.:|....:..:........
  Fly   122 DGLYEINGNILALPIKGNGPFTGNFTNFVAYVRVQYDIKSVNDLEYLHVKEFVLKIRTGKGNLKL 186

  Fly   196 SNLFNGNKQLEDSTNKFFNDNWRMLADALYTVITQTIEDILLDVLKKIFHFIPANFFVSDI 256
            .|||||:|.|.|..|...|.|:.:..:.|...|.:.:|...|.:..||..    ||..|::
  Fly   187 ENLFNGDKVLGDVINDTINQNFEVFTNDLIAPIARALEAKFLVITTKILE----NFTYSEL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp6NP_001014600.1 JHBP 8..253 CDD:461956 57/246 (23%)
Jhbp3NP_649507.1 JHBP 10..245 CDD:461956 57/248 (23%)

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