DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trxr-2 and GLR1

DIOPT Version :9

Sequence 1:NP_524216.1 Gene:Trxr-2 / 40475 FlyBaseID:FBgn0037170 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_015234.1 Gene:GLR1 / 856014 SGDID:S000006012 Length:483 Species:Saccharomyces cerevisiae


Alignment Length:517 Identity:174/517 - (33%)
Similarity:270/517 - (52%) Gaps:63/517 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SSTHNALRSSLGWCRLAASRPRYDYDLVVLGGGSAGLACAKEAAGCGARVLCFDYVKPTPVGTKW 73
            |:|....| ||....::.:...|||  :|:||||.|:|.|:.||..||:.|.        |..| 
Yeast     3 SATKQTFR-SLQIRTMSTNTKHYDY--LVIGGGSGGVASARRAASYGAKTLL--------VEAK- 55

  Fly    74 GIGGTCVNVGCIPKKLMHQASLLGEAVHEAVAYG----WNVDDTNIRPDWRKLVRSVQNHIKSVN 134
            .:|||||||||:|||:|..||.|...|..|..||    ..:|..::..:|.:..:....::..:|
Yeast    56 ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHLTFNWPEFKQKRDAYVHRLN 120

  Fly   135 WVTRVDLRDKKVEYVNSMATFRDSHTIEYVAMPGAEHRQVTSE-----YVVVAVGGRPRYPD-IP 193
            .:.:.:|..:||:.|...|.|.....:|      .:.|..|:|     :::||.||:..:|: ||
Yeast   121 GIYQKNLEKEKVDVVFGWARFNKDGNVE------VQKRDNTTEVYSANHILVATGGKAIFPENIP 179

  Fly   194 GAVELGITSDDIFSYEREPGRTLVVGAGYVGLECACFLKGLGYEPTVMVR-SIVLRGFDRQMSEL 257
            | .|||..||..|..|.:|.:.:||||||:|:|.|....|||.|..:::| ..|||.||..:...
Yeast   180 G-FELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNT 243

  Fly   258 LAAMMTERGIPFLGTTIPKAVERQADGRLLVRYRNTTTQMDGSDVFDTVLWAIGRKGLIEDLNLD 322
            :.....:.||.....:....||:..:...|..:.|.:..:|  || |.::|.||||..: .:..:
Yeast   244 ITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSID--DV-DELIWTIGRKSHL-GMGSE 304

  Fly   323 AAGVKTHD-DKIVVDAAEATSVPHIFAVGDIIYGRPELTPVAILSGRLLARRLFAGS---TQLMD 383
            ..|:|.:. |:|:.|..:.|:||:|:::||:: |:.|||||||.:||.|:.|||...   ...:|
Yeast   305 NVGIKLNSHDQIIADEYQNTNVPNIYSLGDVV-GKVELTPVAIAAGRKLSNRLFGPEKFRNDKLD 368

  Fly   384 YADVATTVFTPLEYSCVGMSEETAIELRGADNIEVFHG-----YY------KPTEFFIPQKSVRH 437
            |.:|.:.:|:..|...:|:||:.|||..|.:||:|::.     ||      .||.:         
Yeast   369 YENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRY--------- 424

  Fly   438 CYLKAVAEVSGDQKILGLHYIGPVAGEVIQGFAAALKTGLTVKTLLNTVGIHPTTAEEFTRL 499
               |.|. ...::|::|||.:|..:.|::|||..|:|.|.|.....|.|.||||:|||...:
Yeast   425 ---KIVC-AGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELVTM 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr-2NP_524216.1 NADB_Rossmann 29..>68 CDD:304358 16/38 (42%)
TGR 31..515 CDD:273624 169/495 (34%)
NADB_Rossmann <144..239 CDD:304358 38/100 (38%)
Pyr_redox 214..288 CDD:278498 23/74 (31%)
Pyr_redox_dim 388..497 CDD:280934 40/119 (34%)
GLR1NP_015234.1 gluta_reduc_1 22..483 CDD:273614 169/497 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I738
eggNOG 1 0.900 - - E1_COG1249
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 253 1.000 Inparanoid score I652
Isobase 1 0.950 - 0 Normalized mean entropy S706
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000578
OrthoInspector 1 1.000 - - otm46525
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R529
SonicParanoid 1 1.000 - - X1089
TreeFam 00.000 Not matched by this tool.
98.840

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