DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trxr-2 and AT4G16155

DIOPT Version :9

Sequence 1:NP_524216.1 Gene:Trxr-2 / 40475 FlyBaseID:FBgn0037170 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_567487.5 Gene:AT4G16155 / 827307 AraportID:AT4G16155 Length:567 Species:Arabidopsis thaliana


Alignment Length:556 Identity:137/556 - (24%)
Similarity:224/556 - (40%) Gaps:103/556 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKFLRSSTHNALRSSLGWCRLAASRPRYDYDLVVLGGGSAGLACAKEAAGCGARVLCFDYVKPTP 68
            |:..|.....|..||.|   ..|....:||||:::|.|..|...|..|...|.:....:      
plant    59 IQSRRIEVSAAASSSAG---NGAPSKSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIE------ 114

  Fly    69 VGTKWG--IGGTCVNVGCIPKKLMHQAS-----LLGEAVHEAVAYGWNV-----DDTNIRPDWRK 121
                 |  :||||||.||:|.|.:...|     |..|  |...|:|..|     |...:......
plant   115 -----GDVVGGTCVNRGCVPSKALLAVSGRMRELQNE--HHMKAFGLQVSAAGYDRQGVADHASN 172

  Fly   122 LVRSVQNHIKSVNWVTRVD--------LRDKKVEYVNSMATFRDSHTIEYVAMPGAEHRQVTSEY 178
            |...::|::.:......||        |..:||:|.:::.|.:|                     
plant   173 LATKIRNNLTNSMKALGVDILTGFGAVLGPQKVKYGDNIITGKD--------------------- 216

  Fly   179 VVVAVGGRPRYPDIPGAVELG----ITSDDIFSYEREPGRTLVVGAGYVGLECACFLKGLGYEPT 239
            :::|.|.   .|.:|..:|:.    ||||.....|..|....:||:||:|||.:.....||.|.|
plant   217 IIIATGS---VPFVPKGIEVDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVT 278

  Fly   240 -VMVRSIVLRGFDRQMSELL-AAMMTERGIPFLGTTIPKAVERQADGR-LLVRYRNTTTQ--MDG 299
             :.....::.|||.::|:|. ..::..|.|.:........:....||: :|:...:..|:  .|.
plant   279 FIEALDQLMPGFDPEISKLAQRVLINTRKIDYHTGVFASKITPAKDGKPVLIELIDAKTKEPKDT 343

  Fly   300 SDVFDTVLWAIGRKGLIEDLNLDAAGVKTH------DDKIVVDAAEATSVPHIFAVGDIIYGRPE 358
            .:| |..|.|.||......|.|:...|.|.      |:::.|.......|||::.:|| ..|:..
plant   344 LEV-DAALIATGRAPFTNGLGLENINVTTQRGFIPVDERMRVIDGNGKLVPHLYCIGD-ANGKLM 406

  Fly   359 LTPVAILSGRLLARRLFAGSTQLMDYADVATTVFTPLEYSCVGMSEETAIELRGADNIEVFHGYY 423
            |...|...|..:..:: .|...::::..:....||..|.|.||::|..|.|....:..:|     
plant   407 LAHAASAQGISVVEQV-TGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFKV----- 465

  Fly   424 KPTEFFIPQKSVRHCYLKAVAEVSGD-----------QKILGLHYIGPVAGEVIQGFAAALKTGL 477
                 .|.:.|.: ...||:||..|:           .:|||:|..|..|.::|...:.|:..|.
plant   466 -----SIAKTSFK-ANTKALAENEGEGLAKMIYRPDNGEILGVHIFGLHAADLIHEASNAIALGT 524

  Fly   478 TVKTLLNTVGIHPTTAEEFTRLSITKRSGRDPTPAS 513
            .::.:...|..|||.:|....|.   ::.:..:|||
plant   525 RIQDIKLAVHAHPTLSEVVDELF---KAAKVDSPAS 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr-2NP_524216.1 NADB_Rossmann 29..>68 CDD:304358 10/38 (26%)
TGR 31..515 CDD:273624 130/529 (25%)
NADB_Rossmann <144..239 CDD:304358 26/98 (27%)
Pyr_redox 214..288 CDD:278498 20/76 (26%)
Pyr_redox_dim 388..497 CDD:280934 31/119 (26%)
AT4G16155NP_567487.5 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1249
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D581771at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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