DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trxr2 and Aifm3

DIOPT Version :10

Sequence 1:NP_524216.1 Gene:Trxr2 / 40475 FlyBaseID:FBgn0037170 Length:516 Species:Drosophila melanogaster
Sequence 2:XP_008767097.1 Gene:Aifm3 / 303786 RGDID:1306028 Length:608 Species:Rattus norvegicus


Alignment Length:507 Identity:103/507 - (20%)
Similarity:184/507 - (36%) Gaps:157/507 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DLVVLGGGSAGLACAK--EAAGCGAR-VLC-------FDYVKPTPVGTKWGIGGTCVNVGCIPKK 88
            :::::|.|:|||.||:  ...|...| |||       :|..|                   :.|.
  Rat   195 NVLIVGAGAAGLVCAETLRQEGFSDRIVLCTLDRHLPYDRAK-------------------LSKS 240

  Fly    89 LMHQASLLGEAVHEAVAYGWNVDDTNIRPDWRKLVRSVQNHIKSVNWVTRVDLRDKKVEYVNSMA 153
            |        :|..|.:|         :||  ::..|:....:.:...|..||:|:|||       
  Rat   241 L--------DAQPEQLA---------LRP--KEFFRAYGIEMLTEAQVVTVDVRNKKV------- 279

  Fly   154 TFRDSHTIEY---VAMPGAEHRQVTSEYVVVAVGGRPRYPDIPGAVELGITSDDIFSYEREPGR- 214
            .|:|...:||   :..||:..:.:|.:       |:    ||.....:....|.........|| 
  Rat   280 VFKDGFKLEYSKLLLAPGSSPKTLTCK-------GK----DIENVFTIRTPEDANRVLRLARGRN 333

  Fly   215 TLVVGAGYVGLECACFLKGLGYEPTVMVRSIVLRGFDRQMSELLAAMMTERGIPFLGTTIPKAVE 279
            .:|||||::|:|.|.:|....:  :|.|..:....|.|                |||..:.:|:.
  Rat   334 AVVVGAGFLGMEVAAYLTEKAH--SVSVVELEETPFRR----------------FLGERVGRALM 380

  Fly   280 RQADGRLLVRYRNT------------------TTQMDGSDVFDTVLWAIGRKGLIED--LNLDAA 324
            :..:...:..|..|                  ::::..:||....:.|:...|.:..  :.||:.
  Rat   381 KMFENNRVKFYMQTEVSELRAQEGKLQEVVLKSSKVLRADVCVVGIGAVPATGFLRQSGIGLDSR 445

  Fly   325 GVKTHDDKIVVDAAEATSVPHIFAVGDII-------YGRPELTP---VAILSGRLLARRLFAGST 379
            |.      |.|:....|::|.:||.||.:       ..|....|   :|...||:.|:.:.|...
  Rat   446 GF------IPVNKMMQTNIPGVFAAGDAVTFPLAWRNNRKVNIPHWQMAHAQGRVAAQNMLAQEA 504

  Fly   380 QLMDYADVATTVF-TPLEYSCVGMSEETAIELRGADNIEVFHGYYKPTEFFIPQKSVRHCYLKAV 443
            ::.....:.|.:| ..|.|:..|...:..|.....:.::....|.|..|..            ||
  Rat   505 EINTVPYLWTAMFGKSLRYAGYGEGFDDVIIQGDLEELKFVAFYTKGDEVI------------AV 557

  Fly   444 AEVSGDQKILGLHYIGPVAGEVIQGFAAALKTGLTVKT------LLNTVGIH 489
            |.::.|          |:..:|    |..|.:|..::.      :|::..:|
  Rat   558 ASMNYD----------PIVSKV----AEVLASGRAIRKREVELFMLHSKYVH 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr2NP_524216.1 TGR 31..515 CDD:273624 103/507 (20%)
Aifm3XP_008767097.1 Rieske_AIFL_N 70..163 CDD:239560
NirB 193..561 CDD:440863 95/457 (21%)
Blue background indicates that the domain is not in the aligned region.

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