DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trxr-2 and Txnrd3

DIOPT Version :9

Sequence 1:NP_524216.1 Gene:Trxr-2 / 40475 FlyBaseID:FBgn0037170 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001171641.1 Gene:Txnrd3 / 297437 RGDID:1308363 Length:652 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr-2NP_524216.1 NADB_Rossmann 29..>68 CDD:304358
TGR 31..515 CDD:273624
NADB_Rossmann <144..239 CDD:304358
Pyr_redox 214..288 CDD:278498
Pyr_redox_dim 388..497 CDD:280934
Txnrd3NP_001171641.1 GRX_GRXh_1_2_like 76..157 CDD:239511
NADB_Rossmann 163..>195 CDD:304358
TGR 164..652 CDD:273624
Pyr_redox 345..421 CDD:278498
Pyr_redox_dim 524..634 CDD:280934
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5175
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57703
OrthoDB 1 1.010 - - D164705at33208
OrthoFinder 1 1.000 - - FOG0000578
OrthoInspector 1 1.000 - - mtm8943
orthoMCL 1 0.900 - - OOG6_100956
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

Return to query results.
Submit another query.