DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11425 and PAP1

DIOPT Version :10

Sequence 1:NP_649395.1 Gene:CG11425 / 40472 FlyBaseID:FBgn0037167 Length:305 Species:Drosophila melanogaster
Sequence 2:NP_001323948.1 Gene:PAP1 / 814646 AraportID:AT2G01180 Length:330 Species:Arabidopsis thaliana


Alignment Length:238 Identity:70/238 - (29%)
Similarity:117/238 - (49%) Gaps:36/238 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLVDLVLLGLLIVLVENFRRLWGPPTKRGFFCDDESLMYPYHENTVSPTLLHW-LGLYLPLISLV 76
            :||.|:.:.:.:.|:..|.|..|    :....|   |.||:.:||| |.   | :.:|..|:.::
plant    56 ILVILIAIEIGLNLISPFYRYVG----KDMMTD---LKYPFKDNTV-PI---WSVPVYAVLLPII 109

  Fly    77 VLESFLSHRKDMAPWPTLWPVYNTVRWFLYGYVSNDLLKGIGKQALGRLRPHFFAVCSPHFPDGS 141
            |...|...|      ..::.:::::...|:..:...::....|.|.||.||:|:..|   ||||.
plant   110 VFVCFYLKR------TCVYDLHHSILGLLFAVLITGVITDSIKVATGRPRPNFYWRC---FPDGK 165

  Fly   142 SCLDESHRGALKYHTDYECRPNLSQATEEMIRDVNVSFPSGHSAMAFYGLVFVALHL--RRRRWP 204
            ...|.  .|.:..|         .:|.|  :::.:.||||||::.:|.||.|::|:|  :.:.:.
plant   166 ELYDA--LGGVVCH---------GKAAE--VKEGHKSFPSGHTSWSFAGLTFLSLYLSGKIKAFN 217

  Fly   205 LRGSLLSPVLQLACVALAWFVAISRVIDYKHHWSDVAAGSLLG 247
            ..|.:....|.:..:..|..|.||||.||.|||.||.||:|:|
plant   218 NEGHVAKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11425NP_649395.1 PAP2_wunen 96..255 CDD:239479 49/154 (32%)
PAP1NP_001323948.1 PLN02715 18..330 CDD:178317 70/238 (29%)

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