DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11425 and PAP1

DIOPT Version :9

Sequence 1:NP_649395.1 Gene:CG11425 / 40472 FlyBaseID:FBgn0037167 Length:305 Species:Drosophila melanogaster
Sequence 2:NP_001323948.1 Gene:PAP1 / 814646 AraportID:AT2G01180 Length:330 Species:Arabidopsis thaliana


Alignment Length:238 Identity:70/238 - (29%)
Similarity:117/238 - (49%) Gaps:36/238 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLVDLVLLGLLIVLVENFRRLWGPPTKRGFFCDDESLMYPYHENTVSPTLLHW-LGLYLPLISLV 76
            :||.|:.:.:.:.|:..|.|..|    :....|   |.||:.:||| |.   | :.:|..|:.::
plant    56 ILVILIAIEIGLNLISPFYRYVG----KDMMTD---LKYPFKDNTV-PI---WSVPVYAVLLPII 109

  Fly    77 VLESFLSHRKDMAPWPTLWPVYNTVRWFLYGYVSNDLLKGIGKQALGRLRPHFFAVCSPHFPDGS 141
            |...|...|      ..::.:::::...|:..:...::....|.|.||.||:|:..|   ||||.
plant   110 VFVCFYLKR------TCVYDLHHSILGLLFAVLITGVITDSIKVATGRPRPNFYWRC---FPDGK 165

  Fly   142 SCLDESHRGALKYHTDYECRPNLSQATEEMIRDVNVSFPSGHSAMAFYGLVFVALHL--RRRRWP 204
            ...|.  .|.:..|         .:|.|  :::.:.||||||::.:|.||.|::|:|  :.:.:.
plant   166 ELYDA--LGGVVCH---------GKAAE--VKEGHKSFPSGHTSWSFAGLTFLSLYLSGKIKAFN 217

  Fly   205 LRGSLLSPVLQLACVALAWFVAISRVIDYKHHWSDVAAGSLLG 247
            ..|.:....|.:..:..|..|.||||.||.|||.||.||:|:|
plant   218 NEGHVAKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11425NP_649395.1 PAP2_wunen 96..255 CDD:239479 49/154 (32%)
PAP1NP_001323948.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0671
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001532
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10165
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X622
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.000

Return to query results.
Submit another query.