DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11425 and plpp2

DIOPT Version :9

Sequence 1:NP_649395.1 Gene:CG11425 / 40472 FlyBaseID:FBgn0037167 Length:305 Species:Drosophila melanogaster
Sequence 2:NP_989117.1 Gene:plpp2 / 394722 XenbaseID:XB-GENE-5816438 Length:283 Species:Xenopus tropicalis


Alignment Length:244 Identity:82/244 - (33%)
Similarity:124/244 - (50%) Gaps:32/244 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VLLGLLIVLVEN----FRRLWGPPTKRGFFCDDESLMYPYHENTVSPTLLHWLGLYLPLISL--- 75
            |:|.:|.|.|.:    ...|...|.||||:|:|||:.|||.|:|::..|:..:.:...:|.:   
 Frog    10 VVLDVLCVSVASLPFIIMSLVNSPYKRGFYCNDESIRYPYREDTITNGLMAGVTISCTVIIISSG 74

  Fly    76 ---VVLESFLSHRKDMAPWPTLWPVYNTVRWFLYGYVSNDLLKGIGKQALGRLRPHFFAVCSPHF 137
               :|....|..|.:...:  :..:|..|..:|:|...:..|..:.|..:||.||:|.|||.|  
 Frog    75 EMYMVFSKRLYSRSECNNY--IAALYKVVGTYLFGAAISQSLTDLAKYMIGRPRPNFIAVCDP-- 135

  Fly   138 PDGSSCLDESHRGALKYHTDYECRPNLSQATEEMIRDVNVSFPSGHSAMAFYGLVFVALHLRRR- 201
                   |.|......|.||:.||.|.:..|     |..:||.||||:...|.::|::|:::.| 
 Frog   136 -------DWSTVNCSGYVTDFTCRGNYANVT-----DSRLSFYSGHSSFGMYCMLFLSLYVQARL 188

  Fly   202 --RWPLRGSLLSPVLQLACVALAWFVAISRVIDYKHHWSDVAAGSLLGA 248
              :|   ..||.|.:|...::.|.:|..:||.|||||||||..|.|.||
 Frog   189 CGKW---ARLLRPTIQFFLLSFALYVGYTRVSDYKHHWSDVLVGLLQGA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11425NP_649395.1 PAP2_wunen 96..255 CDD:239479 57/156 (37%)
plpp2NP_989117.1 PAP2_wunen 96..241 CDD:239479 57/156 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48083
OrthoDB 1 1.010 - - D434801at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10165
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.120

Return to query results.
Submit another query.