DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11426 and LCB3

DIOPT Version :9

Sequence 1:NP_649394.1 Gene:CG11426 / 40471 FlyBaseID:FBgn0037166 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_012401.1 Gene:LCB3 / 853307 SGDID:S000003670 Length:409 Species:Saccharomyces cerevisiae


Alignment Length:181 Identity:40/181 - (22%)
Similarity:67/181 - (37%) Gaps:49/181 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 YVELGRQSTYF--CFGLLLTFDATEVGK----------YTIGRLRPHFLAVCQPQIADGSMCSDP 180
            |..|....|::  |..:.:.|...|..|          |..|..:.::   |.|:..     :.|
Yeast    84 YTSLMGSHTFYVLCLPMPVWFGYFETTKDMVYILGYSIYLSGFFKDYW---CLPRPR-----APP 140

  Fly   181 VNLHRYMENYDCAGEGFTVEDVRQARLSFPSGHSSLAFYAMIYVALYLQRKITWRGSKLSRHFVQ 245
              |||           .|:.:........||.|::.|....:   |:|..  .||..: |...||
Yeast   141 --LHR-----------ITLSEYTTKEYGAPSSHTANATGVSL---LFLYN--IWRMQE-SSVMVQ 186

  Fly   246 --FAVVMVAWYTAL--SRVMDHWHHWSDVLSGSLLGVAGALITAHYIARMF 292
              .:.|::.:|..|  .|:....|...|::||.|:|:      ..:|.||:
Yeast   187 LLLSCVVLFYYMTLVFGRIYCGMHGILDLVSGGLIGI------VCFIVRMY 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11426NP_649394.1 PAP2_wunen 130..285 CDD:239479 36/170 (21%)
LCB3NP_012401.1 PAP2_SPPase1 77..230 CDD:239482 38/178 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0671
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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