DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11438 and LCB3

DIOPT Version :10

Sequence 1:NP_649392.1 Gene:CG11438 / 40469 FlyBaseID:FBgn0037164 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_012401.1 Gene:LCB3 / 853307 SGDID:S000003670 Length:409 Species:Saccharomyces cerevisiae


Alignment Length:191 Identity:43/191 - (22%)
Similarity:70/191 - (36%) Gaps:49/191 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 YRQVIFYLYGLAMVTFTTMLTKLCLGRLRPH-FLAVCQPM---------LPD-----GSSCQDAQ 154
            ||.....||    .|:|:::..        | |..:|.||         ..|     |.|..   
Yeast    73 YRSAFNDLY----FTYTSLMGS--------HTFYVLCLPMPVWFGYFETTKDMVYILGYSIY--- 122

  Fly   155 NLGRYIDSFTC---------SNANMTDYQFKELYQSFPSGHASMAMYAMLYLAIYLQAALSTRVS 210
             |..:...:.|         ....:::|..||  ...||.|.:.|....|   ::|......:.|
Yeast   123 -LSGFFKDYWCLPRPRAPPLHRITLSEYTTKE--YGAPSSHTANATGVSL---LFLYNIWRMQES 181

  Fly   211 KLLKHLLQFLFVMFGWYVSLT--RIIDYYHHWSDVLAGAALGVVFAWLTSAYVADLFAGKR 269
            .::..||....|:| :|::|.  ||....|...|:::|..:|:| .::...|....|.|.|
Yeast   182 SVMVQLLLSCVVLF-YYMTLVFGRIYCGMHGILDLVSGGLIGIV-CFIVRMYFKYRFPGLR 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11438NP_649392.1 PAP2_wunen 104..257 CDD:239479 39/177 (22%)
LCB3NP_012401.1 PAP2_SPPase1 77..230 CDD:239482 37/175 (21%)

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