DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11438 and PAP1

DIOPT Version :10

Sequence 1:NP_649392.1 Gene:CG11438 / 40469 FlyBaseID:FBgn0037164 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001323948.1 Gene:PAP1 / 814646 AraportID:AT2G01180 Length:330 Species:Arabidopsis thaliana


Alignment Length:304 Identity:79/304 - (25%)
Similarity:128/304 - (42%) Gaps:60/304 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SKLARGFCDLLIWVALSVASVLLHKMGRPFRRGFFCGDE---TLSYPARDGTIS--SKVIIAIVL 64
            ||....:..|:|.:|:.:...|:    .||.|  :.|.:   .|.||.:|.|:.  |..:.|::|
plant    48 SKHKHDWIILVILIAIEIGLNLI----SPFYR--YVGKDMMTDLKYPFKDNTVPIWSVPVYAVLL 106

  Fly    65 GVPNAVIVVVELFRQLPGGPLREAGGKRDSCRIAHRLGV--LYRQVIFYLYGLAMVTFTTMLTKL 127
                .:||.|                    |....|..|  |:..::..|:.:.:....|...|:
plant   107 ----PIIVFV--------------------CFYLKRTCVYDLHHSILGLLFAVLITGVITDSIKV 147

  Fly   128 CLGRLRPHFLAVCQPMLPDGSSCQDAQNLGRYIDSFTCSNANMTDYQFKELYQSFPSGHASMAMY 192
            ..||.||:|...|   .|||....||  ||..:    |.....   :.||.::||||||.|.:..
plant   148 ATGRPRPNFYWRC---FPDGKELYDA--LGGVV----CHGKAA---EVKEGHKSFPSGHTSWSFA 200

  Fly   193 AMLYLAIYLQAALSTRVSKLLKHLLQFLFVMF----GWYVSLTRIIDYYHHWSDVLAGAALG-VV 252
            .:.:|::||...:....::  .|:.:...|:|    ...|.::|:.||:|||.||.|||.:| :|
plant   201 GLTFLSLYLSGKIKAFNNE--GHVAKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIGTLV 263

  Fly   253 FAWLTSAYVADLFAGKRWPKTGYSANTLRKPQVSPKSSTKSQAG 296
            .|:....:..:.:..:.|....|    .:..|......|.||.|
plant   264 AAFCYRQFYPNPYHEEGWGPYAY----FKAAQERGVPVTSSQNG 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11438NP_649392.1 PAP2_wunen 104..257 CDD:239479 48/157 (31%)
PAP1NP_001323948.1 PLN02715 18..330 CDD:178317 79/304 (26%)

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