DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11438 and plpp-1.3

DIOPT Version :10

Sequence 1:NP_649392.1 Gene:CG11438 / 40469 FlyBaseID:FBgn0037164 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_509790.2 Gene:plpp-1.3 / 181268 WormBaseID:WBGene00008749 Length:304 Species:Caenorhabditis elegans


Alignment Length:264 Identity:76/264 - (28%)
Similarity:126/264 - (47%) Gaps:39/264 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CDLLIWVALSVASVLLHKMGRPFRRGFFCGDETLSYPARDGTISSKVIIAIVLGVPNAVIVVVEL 76
            |.|.:|.:.|..:        |:.|...|||.::..|.::.|:..|.::.|.||.|..::.:||.
 Worm    50 CSLFLWFSGSGIN--------PYERAMPCGDISIQQPFKENTVGLKHLLVITLGSPFLIVALVEA 106

  Fly    77 FRQLPGGPLREAGGKRDSCRIAHRLGVLYRQVIFYLYGLAMVTFTTMLTKLCLGRLRPHFLAVCQ 141
            .....         .:.|.|:|..........:.||...|..||.....|..:|||||||.:||:
 Worm   107 ILHFK---------SKGSNRLAKFFSATTITYLKYLLMYAACTFAMEFLKCYVGRLRPHFFSVCK 162

  Fly   142 PMLPDGS--SCQDAQNLGRYIDS--FTCSNANMTDYQFKELYQSFPSGHASMAMYAMLYLAIYL- 201
               ||.|  .|.|.|:   :|||  ..|:|.|  ..:.:....||||||.:.|.:..|::.||| 
 Worm   163 ---PDWSKVDCTDKQS---FIDSSDLVCTNPN--PRKIRTARTSFPSGHTAAAFHVFLFVYIYLR 219

  Fly   202 QAALSTRVSKL--LKHLLQFLFVMFGWYVSLTRIIDYYHHWSDVLAGAALGVVF-------AWLT 257
            :.|.:|.:.::  ::::|...:.::..:.::||:.|.:|..:|||.|..|.|||       :|.|
 Worm   220 RMAENTGIKEIITIRNILVPSYALWTVFCAVTRVTDNWHFPTDVLGGVILAVVFIIPAFYSSWTT 284

  Fly   258 SAYV 261
            :..:
 Worm   285 TEMI 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11438NP_649392.1 PAP2_wunen 104..257 CDD:239479 54/166 (33%)
plpp-1.3NP_509790.2 PAP2_like 73..280 CDD:469784 65/223 (29%)

Return to query results.
Submit another query.