DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment laza and CAX4

DIOPT Version :9

Sequence 1:NP_649391.1 Gene:laza / 40468 FlyBaseID:FBgn0037163 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_011550.3 Gene:CAX4 / 852924 SGDID:S000003268 Length:239 Species:Saccharomyces cerevisiae


Alignment Length:89 Identity:22/89 - (24%)
Similarity:36/89 - (40%) Gaps:18/89 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 PSAHSSLSFYSMVLLALYVHGVWRGRGGVRVLRHVLQFL--------LLMAALCVSLSRVADYWH 197
            |||||....:.....:|.::..|:.          |.||        |.:.:.||..|||..::|
Yeast   105 PSAHSQFMGFCFTYNSLKIYTSWKN----------LNFLEKCIFSGALALLSFCVCFSRVYLHYH 159

  Fly   198 HWSDVLAGALLGVTYAAITAAYVG 221
            :...|:.|..:|....::....||
Yeast   160 NLDQVIVGFSVGALTGSLYFFIVG 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lazaNP_649391.1 PAP2_wunen 62..217 CDD:239479 20/83 (24%)
CAX4NP_011550.3 PAP2_dolichyldiphosphatase 17..179 CDD:239477 20/83 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0671
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.