DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment laza and LPP3

DIOPT Version :10

Sequence 1:NP_649391.1 Gene:laza / 40468 FlyBaseID:FBgn0037163 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_566177.1 Gene:LPP3 / 821299 AraportID:AT3G02600 Length:364 Species:Arabidopsis thaliana


Alignment Length:271 Identity:88/271 - (32%)
Similarity:123/271 - (45%) Gaps:61/271 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHTFKRGFFCSDL--SIRYPYKDCTITVPMLLLMMLLLPM-LFVAVVEIMRICKRFRTRLYFR-- 60
            :|.|.| |...|:  .:.||.|..|:.:..:.:..:|||: :|:.:              |||  
plant    92 IHPFYR-FVGKDMMTDLSYPLKSNTVPIWSVPVYAMLLPLVIFIFI--------------YFRRR 141

  Fly    61 ---NLWRAEATFSFGFIATYLTTELAKHAVGRLRPHFFHGCQPRLDDGSSCSDLQNAELYVEQFH 122
               :|..|.....:..:.|.:.|:..|:||||.||.||..|.|   ||.:..|.....:      
plant   142 DVYDLHHAVLGLLYSVLVTAVLTDAIKNAVGRPRPDFFWRCFP---DGKALYDSLGDVI------ 197

  Fly   123 CTNNNLSTRQIRELHVSFPSAHSSLSFYSMVLLALYVHG---VWRGRGGVRVLRHVLQFLLLMAA 184
            |..:.   ..|||.|.||||.|:|.||..:..|:||:.|   .:.|:|.|..|..|: ..||.||
plant   198 CHGDK---SVIREGHKSFPSGHTSWSFSGLGFLSLYLSGKIQAFDGKGHVAKLCIVI-LPLLFAA 258

  Fly   185 LCVSLSRVADYWHHWSDVLAGALLGVTYAAI----------------TAAY--VGNLLRRQTSST 231
            | |.:|||.||||||.||.||.|||:..:.|                ..||  |....|.|.::.
plant   259 L-VGISRVDDYWHHWQDVFAGGLLGLAISTICYLQFFPPPYHTEGWGPYAYFQVLEAARVQGAAN 322

  Fly   232 GRI---PPSLN 239
            |.:   ||.:|
plant   323 GAVQQPPPQVN 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lazaNP_649391.1 PAP2_wunen 62..217 CDD:239479 63/173 (36%)
LPP3NP_566177.1 PLN02731 1..364 CDD:178332 88/271 (32%)

Return to query results.
Submit another query.