DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment laza and Plpp1

DIOPT Version :9

Sequence 1:NP_649391.1 Gene:laza / 40468 FlyBaseID:FBgn0037163 Length:334 Species:Drosophila melanogaster
Sequence 2:XP_038958986.1 Gene:Plpp1 / 64369 RGDID:621832 Length:299 Species:Rattus norvegicus


Alignment Length:272 Identity:97/272 - (35%)
Similarity:146/272 - (53%) Gaps:33/272 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 HT-FKRGFFCSDLSIRYPYKDCTITVPMLLLMMLLLPMLFVAVV--EIMRI------CKRFRTRL 57
            || |:||.||:|.||:|||::.||  |..||..:::|...:.::  |.:.:      ...|.:..
  Rat    48 HTPFQRGVFCTDESIKYPYREDTI--PYALLGGIVIPFCIIVMITGETLSVYFNVLHSNSFVSNH 110

  Fly    58 YFRNLWRAEATFSFGFIATYLTTELAKHAVGRLRPHFFHGCQPRLDDGS--SCSDLQNAELYVEQ 120
            |...:::|...|.||..|:...|::||:::|||||||...|.|   |.|  :|||     .|:|.
  Rat   111 YIATIYKAVGAFLFGASASQSLTDIAKYSIGRLRPHFLAVCNP---DWSKINCSD-----GYIEN 167

  Fly   121 FHCTNNNLSTRQIRELHVSFPSAHSSLSFYSMVLLALYVHGVWRGRGGVRVLRHVLQFLLLMAAL 185
            |.|..|.   :::||..:||.|.|||.|.|.|:.:|||:....:| ...|:||.:|||.|:..::
  Rat   168 FVCQGNE---QKVREGRLSFYSGHSSFSMYCMLFVALYLQARMKG-DWARLLRPMLQFGLVALSI 228

  Fly   186 CVSLSRVADYWHHWSDVLAGALLGVTYAAITAAYVGNLLRRQTSSTGRIPPSLNYSHHLHHQLMA 250
            .|.||||:||.|||||||.|.:.|...|.:...||.:..:...|:..|...|        |..:.
  Rat   229 YVGLSRVSDYKHHWSDVLIGLIQGAVVAILVVLYVTDFFKTTESNKERKEDS--------HTTLH 285

  Fly   251 DNNNSTASAKVH 262
            :.:|..:.|:.|
  Rat   286 ETSNRQSYARNH 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lazaNP_649391.1 PAP2_wunen 62..217 CDD:239479 66/156 (42%)
Plpp1XP_038958986.1 PAP2_wunen 115..260 CDD:239479 66/156 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338330
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0671
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48083
OrthoDB 1 1.010 - - D434801at33208
OrthoFinder 1 1.000 - - FOG0000694
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10165
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.860

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