DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment laza and sgpp1a

DIOPT Version :10

Sequence 1:NP_649391.1 Gene:laza / 40468 FlyBaseID:FBgn0037163 Length:334 Species:Drosophila melanogaster
Sequence 2:XP_684347.1 Gene:sgpp1a / 556439 ZFINID:ZDB-GENE-030131-4695 Length:436 Species:Danio rerio


Alignment Length:158 Identity:35/158 - (22%)
Similarity:56/158 - (35%) Gaps:53/158 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 SFPSAH----SSLSFYSMVLLALYVHGVWRGRGGVRVLRHVLQFLLLMA---ALCVSLSRVADYW 196
            |.||.|    ::|.| |:.||..   ..|         .:...|.|.:|   ::.|.:||:....
Zfish   198 SMPSTHAMSGTALPF-SLFLLTC---SRW---------EYPFMFGLSIALFWSILVCISRIYMGM 249

  Fly   197 HHWSDVLAGALLGVTYAAITAAYVGNLLRRQTSSTGRIPPSLNYSH----------HLHHQLMA- 250
            |...:|:.|.|..|...|:....:.::            .:...||          |:...|:| 
Zfish   250 HSVLEVITGFLYSVLILAVLHPMLDDI------------DTFYLSHSYAPLVVLLVHVGFSLVAF 302

  Fly   251 ------DNNNSTASAKVHFLAAAASASM 272
                  .:...||.|    ||.||.|::
Zfish   303 SLDTWSTSRGDTAQA----LATAAGAAL 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lazaNP_649391.1 PAP2_wunen 62..217 CDD:239479 22/84 (26%)
sgpp1aXP_684347.1 PAP2_SPPase1 121..270 CDD:239482 22/84 (26%)

Return to query results.
Submit another query.