DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment laza and plpp3

DIOPT Version :9

Sequence 1:NP_649391.1 Gene:laza / 40468 FlyBaseID:FBgn0037163 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_001016858.3 Gene:plpp3 / 549612 XenbaseID:XB-GENE-941073 Length:307 Species:Xenopus tropicalis


Alignment Length:244 Identity:87/244 - (35%)
Similarity:128/244 - (52%) Gaps:23/244 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FKRGFFCSDLSIRYPYKDC-TITVPMLLLMMLLLPMLFVAVVEIMRI-CKRFRTRLYFRN----- 61
            ::|||:|.|.||:||.... ||:..:|..:.:|:.:|.:.|.|..|| ..:.|...:.:|     
 Frog    62 YRRGFYCDDESIKYPANSGETISDAVLSAVGILIAILAIIVGEFFRIHYLKERPHSFIQNPYVAA 126

  Fly    62 LWRAEATFSFGFIATYLTTELAKHAVGRLRPHFFHGCQPRLDDGSSCSDLQNAELYVEQFHCTNN 126
            |::....|:||...:...|::||.|:|||||||.:.|.|      ..|.:..:..|:|.:.|.. 
 Frog   127 LYKQVGCFAFGCAVSQSFTDIAKVAIGRLRPHFINVCNP------DFSTIDCSLGYIENYQCRG- 184

  Fly   127 NLSTRQIRELHVSFPSAHSSLSFYSMVLLALYVHG--VWRGRGGVRVLRHVLQFLLLMAALCVSL 189
              ...::.|...||.|.|:|.|.|:|:.|.||:..  .||   |.|:||.:|||.|||.|....|
 Frog   185 --PPNKVMEARKSFFSGHASFSMYTMLYLVLYLQSRFTWR---GARLLRPLLQFTLLMMAFYTGL 244

  Fly   190 SRVADYWHHWSDVLAGALLGVTYAAITAAYVGNLLRRQTSSTGRIPPSL 238
            |||:|:.||.||||||.:.|...|.....||.:|.:  |......||::
 Frog   245 SRVSDHKHHPSDVLAGFVQGALVAYCIVFYVSDLFK--TPKKSCTPPTV 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lazaNP_649391.1 PAP2_wunen 62..217 CDD:239479 61/156 (39%)
plpp3NP_001016858.3 PAP2_wunen 126..272 CDD:239479 61/157 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 154 1.000 Domainoid score I4216
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48083
OrthoDB 1 1.010 - - D1621899at2759
OrthoFinder 1 1.000 - - FOG0000694
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10165
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3374
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.060

Return to query results.
Submit another query.