DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment laza and plpp2

DIOPT Version :9

Sequence 1:NP_649391.1 Gene:laza / 40468 FlyBaseID:FBgn0037163 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_989117.1 Gene:plpp2 / 394722 XenbaseID:XB-GENE-5816438 Length:283 Species:Xenopus tropicalis


Alignment Length:268 Identity:94/268 - (35%)
Similarity:134/268 - (50%) Gaps:42/268 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FKRGFFCSDLSIRYPYKDCTITVPMLLLMMLLLPMLFVAVVEIMRICKRFRTRLYFRN------- 61
            :||||:|:|.||||||::.|||..::..:.:...::.::..|:..:   |..|||.|:       
 Frog    34 YKRGFYCNDESIRYPYREDTITNGLMAGVTISCTVIIISSGEMYMV---FSKRLYSRSECNNYIA 95

  Fly    62 -LWRAEATFSFGFIATYLTTELAKHAVGRLRPHFFHGCQPRLDDGSSCSDLQNAELYVEQFHCTN 125
             |::...|:.||...:...|:|||:.:||.||:|...|.|   |.|:.    |...||..|.|..
 Frog    96 ALYKVVGTYLFGAAISQSLTDLAKYMIGRPRPNFIAVCDP---DWSTV----NCSGYVTDFTCRG 153

  Fly   126 NNLSTRQIRELHVSFPSAHSSLSFYSMVLLALYVH----GVWRGRGGVRVLRHVLQFLLLMAALC 186
            |..:   :.:..:||.|.|||...|.|:.|:|||.    |.|     .|:||..:||.||..||.
 Frog   154 NYAN---VTDSRLSFYSGHSSFGMYCMLFLSLYVQARLCGKW-----ARLLRPTIQFFLLSFALY 210

  Fly   187 VSLSRVADYWHHWSDVLAGALLGVTYAAITAAYVGNLLR-----RQTSSTGRIPPSLNYSHHLHH 246
            |..:||:||.|||||||.|.|.|...||.|..||.:..:     :.|.......|||..|.    
 Frog   211 VGYTRVSDYKHHWSDVLVGLLQGAIVAAFTVRYVSDFFKIRPPLQCTKDPLESKPSLQLSE---- 271

  Fly   247 QLMADNNN 254
               :|.|:
 Frog   272 ---SDQNH 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lazaNP_649391.1 PAP2_wunen 62..217 CDD:239479 63/158 (40%)
plpp2NP_989117.1 PAP2_wunen 96..241 CDD:239479 63/159 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 154 1.000 Domainoid score I4216
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48083
OrthoDB 1 1.010 - - D1621899at2759
OrthoFinder 1 1.000 - - FOG0000694
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10165
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

Return to query results.
Submit another query.