DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment laza and Plppr2

DIOPT Version :10

Sequence 1:NP_649391.1 Gene:laza / 40468 FlyBaseID:FBgn0037163 Length:334 Species:Drosophila melanogaster
Sequence 2:XP_006242690.1 Gene:Plppr2 / 300443 RGDID:1597171 Length:452 Species:Rattus norvegicus


Alignment Length:265 Identity:74/265 - (27%)
Similarity:109/265 - (41%) Gaps:37/265 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHTFKRGFFCSDLSIRYPY--KDCTITVPMLLLMMLLL--PMLFVAVVEIMR------------- 48
            :||  :||||.|.:...||  .:.....|..|:..|:.  |.|.:.:.|:.|             
  Rat    44 VHT--QGFFCYDSAYAKPYPGPEAASRAPPALIYALVTAGPTLTILLGELARAFFPAPPSASPVS 106

  Fly    49 --------ICKRFRTRLYFRNLWRAEATFSFGFIATYLTTELAKHAVGRLRPHFFHGCQPR---L 102
                    .|.||...|  |.|.|....:|||...|.:.....:...|...|||...|:|.   |
  Rat   107 GESTIVSGACCRFSPPL--RRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTAL 169

  Fly   103 DDGSSCSDLQNAELYV-EQFHCTNNNLSTRQIRELHVSFPSAHSSLSFYSMVLLALYVHGVWRGR 166
            .......|....:.:| :|..|..   |...:.....:||...::|..|::...|:||..|:|.:
  Rat   170 GCPPPSPDRPGPDRFVTDQSACAG---SPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVK 231

  Fly   167 GGVRVLRHVLQFLLLMAALCVSLSRVADYWHHWSDVLAGALLGVTYAAITAAYVGNLLRRQTSST 231
            |. |:::..|...||..|..|.:.|||:|.:||||||||.|.|...|......|.:..:.:..|.
  Rat   232 GS-RLVKPSLCLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPLSG 295

  Fly   232 GRIPP 236
            .|:.|
  Rat   296 RRLSP 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lazaNP_649391.1 PAP2_wunen 62..217 CDD:239479 49/158 (31%)
Plppr2XP_006242690.1 PAP2_wunen 125..281 CDD:239479 49/159 (31%)

Return to query results.
Submit another query.