DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment laza and plpp-1.1

DIOPT Version :9

Sequence 1:NP_649391.1 Gene:laza / 40468 FlyBaseID:FBgn0037163 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_872025.1 Gene:plpp-1.1 / 173734 WormBaseID:WBGene00018756 Length:385 Species:Caenorhabditis elegans


Alignment Length:254 Identity:96/254 - (37%)
Similarity:138/254 - (54%) Gaps:32/254 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 HTF----KRGFFCSDLSIRYPYKDCTITVPMLLLMMLLLPMLFVAVVEIMRI------CK-RFRT 55
            |.|    :|||:|.|.|||||::|..:|..||:::.||:|:|.:...|:.|.      |: .|:|
 Worm    30 HEFIPPVRRGFYCDDESIRYPFRDSKVTRQMLIVVGLLIPILLILATELFRTLAWEKKCETEFKT 94

  Fly    56 ---------RLYFRNLWRAEATFSFGFIATYLTTELAKHAVGRLRPHFFHGCQPRLDDG-SSCSD 110
                     ||..| |:.....|..|.....|..::||:.:||.||||...|:|  |.| .:|| 
 Worm    95 YHVRNHSVHRLVVR-LYCFIGYFFVGVCFNQLMVDIAKYTIGRQRPHFMDVCRP--DIGYQTCS- 155

  Fly   111 LQNAELYVEQFHCTNNNLSTRQIRELHVSFPSAHSSLSFYSMVLLALYVHG-VWRGRGGVRVLRH 174
              ..:||:..|.||..:  |::|.|..:||.|.||:.|||:....:||:.. ::|.... |:|..
 Worm   156 --QPDLYITDFKCTTTD--TKKIHEAQLSFYSGHSAFSFYAAWFTSLYLQARLFRPLFS-RLLLP 215

  Fly   175 VLQFLLLMAALCVSLSRVADYWHHWSDVLAGALLGVTYAAITAAYVGNLL-RRQTSSTG 232
            |:||||...|..|||:||:||.|||||||.||::|.......|.:|..:. ||:..|.|
 Worm   216 VIQFLLFGGAAYVSLTRVSDYKHHWSDVLVGAIMGSAIGVFVALFVAEVFKRREIPSCG 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lazaNP_649391.1 PAP2_wunen 62..217 CDD:239479 62/156 (40%)
plpp-1.1NP_872025.1 PAP2_wunen 108..258 CDD:239479 63/158 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158345
Domainoid 1 1.000 122 1.000 Domainoid score I3483
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48083
OrthoDB 1 1.010 - - D434801at33208
OrthoFinder 1 1.000 - - FOG0000694
OrthoInspector 1 1.000 - - otm14189
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10165
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3374
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.990

Return to query results.
Submit another query.