DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ten-m and TNN

DIOPT Version :9

Sequence 1:NP_001262211.1 Gene:Ten-m / 40464 FlyBaseID:FBgn0004449 Length:3349 Species:Drosophila melanogaster
Sequence 2:XP_016857537.1 Gene:TNN / 63923 HGNCID:22942 Length:1317 Species:Homo sapiens


Alignment Length:308 Identity:94/308 - (30%)
Similarity:121/308 - (39%) Gaps:58/308 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   930 ILEG-ARTFPARSFP-----PDGTTFGQITLGQKLTKEIQPYSYWNMQFYQSEPAYVKFDYTIPR 988
            |||| ...||..|..     |.|...|.:.|.......::|....|.:...:.....|.|  :|:
Human     8 ILEGLLPVFPRMSLQEMFRFPMGLLLGSVLLVASAPATLEPPGCSNKEQQVTVSHTYKID--VPK 70

  Fly   989 GASIGVYGRRNALPTHTQYHFKEVLSGFSASTRT---ARAAHLSITREVTRYMEPGHWFVSLYND 1050
            .|.:.|    :|.|        :.||...||...   ||.....|.|...|...|        ..
Human    71 SALVQV----DADP--------QPLSDDGASLLALGEAREEQNIIFRHNIRLQTP--------QK 115

  Fly  1051 D----GDVQELTFYAAVAED---------MTQNCPNG-------CSGNGQCLLG--HCQCNPGFG 1093
            |    |.||:|.......|:         ..|.|..|       |||:|...|.  .|.|..|..
Human   116 DCELAGSVQDLLARVKKLEEEMVEMKEQCSAQRCCQGVTDLSRHCSGHGTFSLETCSCHCEEGRE 180

  Fly  1094 GDDCSESVCPVLCSQHGEYTNGECICNPGWKGKECSLRHDECEVADCSGHGHCVSGKCQCMRGYK 1158
            |..|....||..||.||...:|.|:|:..:.|.:|.  :..|. .:|||||.||.|.|||...:.
Human   181 GPACERLACPGACSGHGRCVDGRCLCHEPYVGADCG--YPACP-ENCSGHGECVRGVCQCHEDFM 242

  Fly  1159 GKFCEEVDCPHPNCSGHGFCADGTCICKKGWKGPDCA-TMDQDALQCL 1205
            .:.|.|..|| .:|||||||..|.|.|::|:.|.||| .:....||.|
Human   243 SEDCSEKRCP-GDCSGHGFCDTGECYCEEGFTGLDCAQVVTPQGLQLL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ten-mNP_001262211.1 TNFRSF 1069..1198 CDD:304602 55/138 (40%)
CRD2 1106..1151 CDD:276900 18/44 (41%)
EGF_2 1139..1162 CDD:285248 11/22 (50%)
Keratin_B2 1162..1330 CDD:279797 22/45 (49%)
EGF_2 1167..1194 CDD:285248 14/26 (54%)
DUF3844 1171..>1235 CDD:289707 18/36 (50%)
EGF_2 <1272..1294 CDD:285248
NHL 1750..2065 CDD:302697
NHL repeat 1784..1830 CDD:271320
NHL repeat 1854..1888 CDD:271320
NHL repeat 1911..1950 CDD:271320
NHL repeat 1972..2005 CDD:271320
NHL repeat 2039..2065 CDD:271320
RHS_repeat 2183..2218 CDD:283287
RhsA 2347..3020 CDD:225750
YD_repeat_2x 2795..2836 CDD:273728
Rhs_assc_core 2905..2980 CDD:274730
Tox-GHH 3193..3268 CDD:292269
TNNXP_016857537.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1225
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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