DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ten-m and tnn

DIOPT Version :9

Sequence 1:NP_001262211.1 Gene:Ten-m / 40464 FlyBaseID:FBgn0004449 Length:3349 Species:Drosophila melanogaster
Sequence 2:XP_005171321.1 Gene:tnn / 30234 ZFINID:ZDB-GENE-990415-262 Length:1020 Species:Danio rerio


Alignment Length:1184 Identity:237/1184 - (20%)
Similarity:374/1184 - (31%) Gaps:454/1184 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1178 CADGTCICKKGWKGPDCATMDQDALQCLPDCSGHGTFDLDTQTCTCEAKWSGDDCSKELCDLDCG 1242
            ||.|.|   ||..|.|.:            ||||||:..|:.:|.|...|.|.|||...|..:|.
Zfish   119 CAQGCC---KGGAGVDTS------------CSGHGTYQQDSCSCKCNPGWEGPDCSISSCPDECN 168

  Fly  1243 QHGRCEGDACACDPEWGGEYCNTRLCDVRCNEHGQCKNGTCLCVTGWNGKHCTIEGCPNSCAGHG 1307
            .:|||....|.|...:.|..|:...|...|.:.|.|.:|.|:|.:|::|:.|:|..|||.|.|:|
Zfish   169 DNGRCVDGRCVCYEGYTGHDCSQLTCPNDCKDKGHCVDGKCVCFSGFSGEDCSIATCPNDCIGNG 233

  Fly  1308 QCRVSGEGQWECRCYEGWDGPDCGIALELNCGDS-----KDNDKDGLVDCEDPECCASHVC---- 1363
            :| |.|    :|.|.||:.|.||.:.|    |..     |..|...||:.|.......::.    
Zfish   234 RC-VDG----QCICDEGFFGIDCSMVL----GPKGLRLIKVTDVSLLVEWESVRGAEYYILSYHP 289

  Fly  1364 KTSQLCVSAPKPIDV-------LLRKQPPAITASFFERMKFLIDESSLQNYAKLETFNESIFWNY 1421
            |.::   .|.|.:.|       |:....|.:|        :::     |.||.:...|       
Zfish   290 KGNK---GAIKEVQVENTKNSYLITGLKPGVT--------YIV-----QVYAVIRGIN------- 331

  Fly  1422 FNASRSAVIRGRVVTSLGMGLVGVRVSTTTLLEGFTLTRDDGWFDLMVNGGGAVTLQFGRAPFRP 1486
               |.|..|......|   |:.|::|.:.|         :|.                       
Zfish   332 ---SESDQITATTEVS---GIEGIKVLSQT---------EDS----------------------- 358

  Fly  1487 QSRIVQVPW-NEVVIIDLVVMSMSEEKGLAVTTTHTCFAHDYDLMKPVVLASWKHGFQGACP--- 1547
                :||.| |..:|:|...::.:...|..        .|:..:|...  |..||...|..|   
Zfish   359 ----IQVDWKNPGIIVDYFKLTHASHDGQG--------GHENVVMSQE--ARTKHTIVGLNPGTE 409

  Fly  1548 -------------------------DRSAILAESQVIQESLQIPGTGLN-------LVYHSSRAA 1580
                                     |....||..:|.:.|..:...|:.       |.|  |.|.
Zfish   410 YQIGVQAIKGENEGKASFATGVTDIDAPTNLATREVTENSATVTWDGVRAEIDGYMLTY--SSAE 472

  Fly  1581 GYLSTIKLQLTPDVIPTSLHLIHLRITIEGILFERIFEADPGIKFT---YAWNRLNIYRQRVYGV 1642
            |....||:...    .||..|..|:               ||:.:|   :|:......|:.:...
Zfish   473 GTSREIKVAAG----ATSYQLTSLK---------------PGVLYTVFLWAYKGSRSSRKSMTEA 518

  Fly  1643 TTAVVKVGYQYT-----DCTDIVWDIQTTKLSGHDMSISEVGGWNLDIH-------HRY-NFHEG 1694
            .|.:.......|     |...:.|:.....:.|:.:..|.:.|...::.       :|: ....|
Zfish   519 ETDIDAPTNLMTREVTEDSASVTWNKVQADIDGYMLKYSSLDGSGQEVRVGADSTSYRFTGLKPG 583

  Fly  1695 ILQ-------KGDGSNIYLRNK-------PRIILTTMGDGHQRPLECPDCDGQATKQRLLAPVAL 1745
            :|.       ||..|:.....:       |..:||.         |..:.....|..::.|.:  
Zfish   584 VLYTVYVWAIKGARSSKKSSTEAETDIDAPTNLLTQ---------EVTEDSASVTWNKVQADI-- 637

  Fly  1746 AAAPDGSLFVGDFNYIRRIMTDGSIRTVVKLNATRVSYRYHMALSPLDGTLYVSDPESHQIIRVR 1810
                ||.:       ::....|||.:. |::.|..:|||: ..|.|  |.||.        :.| 
Zfish   638 ----DGYM-------LKYSSLDGSGQE-VRVGADSISYRF-TGLKP--GVLYT--------VSV- 678

  Fly  1811 DTNDYSQPELNWEAVVGSGERCLPGDEAHCGDGALAKDAKLAYPKGIAISSDNILYFADGTNIRM 1875
                       | ||.||........||         :.::..||                |::.
Zfish   679 -----------W-AVKGSRSSRKATTEA---------ETEIDAPK----------------NLKA 706

  Fly  1876 VDRDGIVSTLIGNHMHKSHWKPIPCEGTLKLEEMHLRWPTELAVSPMDNTLHIIDDHMILRMTPD 1940
            .|.....|||.        ||                       :|..|    |:.:::.....|
Zfish   707 TDVQTQTSTLT--------WK-----------------------APQAN----IEGYILTYRAED 736

  Fly  1941 GRVRVISGRPLHCATASTAYDTDLATHATLVMPQSIAFGPLGELYVAESDSQRINRVRVIGTDGR 2005
            |.::.:                    ..||                    :.|.||..:.|    
Zfish   737 GSMQTV--------------------EKTL--------------------TARENRFALSG---- 757

  Fly  2006 IAPFAGAESKCNCLERGCDCFEAEHYLATSAKFNTIAALAVTPDSHVHIADQANYRIRSVMSSIP 2070
                         ||.|      :.|:.|.                  ||.:.:.|.:.|.::..
Zfish   758 -------------LEMG------KKYIVTL------------------IAYRGSKRSKIVETTFS 785

  Fly  2071 EASPSREYEIYAPDMQEIYIFNRFGQHVSTRNILTGETTYVFTYNVNTSNGKLSTV-----TDAA 2130
            ....:.::.:   |..:|         :...|:.:|    |:|..||.:..:...|     ||..
Zfish   786 TVGLAYQFPM---DCTQI---------MRNGNMESG----VYTIYVNNNRSRTMQVYCDMKTDGG 834

  Fly  2131 GNKVFLLRDYTSQVNSIENTK------GQKCRLRMTRMKMLHEL-STPDNYNVTYEYHGPTGLLR 2188
            |..||..|: |.:|:.::..:      |:........:..:||| :||..|...::..       
Zfish   835 GWIVFQRRN-TGKVDFMKKWRDYMKGFGELTEEFWLGLDKIHELTNTPTQYEARFDLG------- 891

  Fly  2189 TKLDSTGRSYVYNYDEFGRLTSAVTPTGRVIELSFDLSVKGAQVKVSENAQKEMSLLIQGATVIV 2253
               ..:.|.|.. ||.|     .|.|:.:..:|:.. |.||       ||         |..:..
Zfish   892 ---SGSDRKYAV-YDNF-----KVAPSKQKFKLTIG-SYKG-------NA---------GDAMTY 930

  Fly  2254 RNGAAESRTTVDMD 2267
            ..||..|  |||.|
Zfish   931 HQGAPFS--TVDSD 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ten-mNP_001262211.1 TNFRSF 1069..1198 CDD:304602 8/19 (42%)
CRD2 1106..1151 CDD:276900
EGF_2 1139..1162 CDD:285248
Keratin_B2 1162..1330 CDD:279797 56/151 (37%)
EGF_2 1167..1194 CDD:285248 7/15 (47%)
DUF3844 1171..>1235 CDD:289707 22/56 (39%)
EGF_2 <1272..1294 CDD:285248 8/21 (38%)
NHL 1750..2065 CDD:302697 51/314 (16%)
NHL repeat 1784..1830 CDD:271320 12/45 (27%)
NHL repeat 1854..1888 CDD:271320 7/33 (21%)
NHL repeat 1911..1950 CDD:271320 5/38 (13%)
NHL repeat 1972..2005 CDD:271320 4/32 (13%)
NHL repeat 2039..2065 CDD:271320 3/25 (12%)
RHS_repeat 2183..2218 CDD:283287 7/34 (21%)
RhsA 2347..3020 CDD:225750
YD_repeat_2x 2795..2836 CDD:273728
Rhs_assc_core 2905..2980 CDD:274730
Tox-GHH 3193..3268 CDD:292269
tnnXP_005171321.1 EGF_alliinase <133..163 CDD:282688 14/41 (34%)
EGF_2 161..189 CDD:285248 8/27 (30%)
EGF_2 193..220 CDD:285248 9/26 (35%)
EGF_2 224..251 CDD:285248 14/31 (45%)
fn3 257..333 CDD:278470 16/101 (16%)
fn3 344..426 CDD:278470 20/130 (15%)
fn3 435..514 CDD:278470 22/99 (22%)
fn3 523..602 CDD:278470 12/78 (15%)
fn3 611..683 CDD:278470 25/118 (21%)
fn3 699..773 CDD:278470 27/205 (13%)
FReD 792..1003 CDD:238040 45/203 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1225
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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