DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ten-m and Tenm1

DIOPT Version :9

Sequence 1:NP_001262211.1 Gene:Ten-m / 40464 FlyBaseID:FBgn0004449 Length:3349 Species:Drosophila melanogaster
Sequence 2:XP_038956357.1 Gene:Tenm1 / 298168 RGDID:1561678 Length:2731 Species:Rattus norvegicus


Alignment Length:2949 Identity:896/2949 - (30%)
Similarity:1435/2949 - (48%) Gaps:450/2949 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   544 RHEAIGMATELTTESETSTLP-------AVIDDDNQS--DNSSSGPTPETTVRSDTDDIVEINTP 599
            :||.....|..:.|||....|       ..:.:.||.  .|.:|.......|...|.:|....||
  Rat    16 KHEMDLAYTSSSDESEDGRKPRQSFNSRETLHEYNQELRRNYNSQSRKRKDVEKSTQEIEFCETP 80

  Fly   600 PSQTAQRTFAAVSHQPAIEHDFQIKGTDAGGLQTEKPATDDINNERDLADNYEVDSKEPTSPGTP 664
            |                         |...|.||:..:......:.::..:.:.:::...||...
  Rat    81 P-------------------------TLCSGYQTDMHSVSRHGYQLEMGSDVDTETEGAASPDHA 120

  Fly   665 ----PQGKVSQQTGKASLQSLQSESDLMMNDASHYEDIDIVKLDGLTISHEEEIYK----TADKE 721
                .:|..|:.   :|..|.::.|.|.:.|..|..     |.||      |..:|    ..|.|
  Rat   121 LRMWIRGMKSEH---SSCLSSRANSALSLTDTDHER-----KSDG------ENGFKFSPVCCDME 171

  Fly   722 NMAPKNQPSQHIDRSQNEVLKGHQQGDEKQPQLEPLKPYVSERVDLPGKRIFLNLTIATDEGSDS 786
              ||       .|.:|:     .|.....|....||.|                           
  Rat   172 --AP-------ADSAQD-----MQSSPHNQFTFRPLPP--------------------------- 195

  Fly   787 VYTLHVEVPTGGGPHFIKEVLTHEKPTAQADSCVPEPPP------------RMPDCPCSCLPPPA 839
                                   ..|...|.:|..:|||            |....|.:..||.:
  Rat   196 -----------------------PPPPPHACTCARKPPPTVDSLQRRSMTTRSQPSPAAPAPPTS 237

  Fly   840 ---PIYLDDTVDIDS------------------------------------APPAKTVTTSTISA 865
               .::|.::..::|                                    :||.:.:..||.|.
  Rat   238 TQDSVHLHNSWVLNSNIPLETRHFLFKHGSGSSAIFSAASQNYPLTSNTVYSPPPRPLPRSTFSR 302

  Fly   866 PINPFHSEEEDDEDGVRDEEQTPSSSTATN-----LPSTEIDNHIAAFT---EPA--VGAGGVPF 920
            |...|:....     ..:.:.|..|:||..     |.:..|..|:...|   :|.  :.|.|:..
  Rat   303 PAFTFNKPYR-----CCNWKCTALSATAITVTLALLLAYVIAVHLFGLTWQLQPVGQIYANGISN 362

  Fly   921 ACPDVMPVLILEGARTFPARSFP--------------PDGTTF--GQITLGQKLTKEIQPYSYWN 969
            ..|         |..:......|              |.|...  |::.:|.::.:.|.|..:|.
  Rat   363 GNP---------GTESMDTTYSPIGGKVSDKSEKKVFPKGRAIDTGEVDIGAQVMQTIPPGLFWR 418

  Fly   970 MQFYQSEPAYVKFDYTIPRGASIGVYGRRNALPTHTQYHFKEVLSGFSASTRTARAAH------- 1027
            .|.....|.|:||:.::.:.:.:|:|||||..|||||:.|.:::.|.....:.::::.       
  Rat   419 FQITIHHPIYLKFNISLAKDSLLGIYGRRNIPPTHTQFDFVKLMDGKQLVKQDSKSSDDIQHSPR 483

  Fly  1028 ---LSITREV--TRYMEPGHWFVSLYNDDGDVQELTFYAAVAEDMTQNCPNGCSGNGQCLLGHCQ 1087
               |:..:|.  ..||:.|.|:::.|| ||...|..|....|.::..:|...|:|||:|:.|||.
  Rat   484 NLILTSLQETGFIEYMDQGPWYLAFYN-DGKKMEQVFVLTTAIEIMDDCSTNCNGNGECISGHCH 547

  Fly  1088 CNPGFGGDDCSESVCPVLCSQHGEYTNGECICNPGWKGKECSLRHDECEVADCSGHGHCVSGKCQ 1152
            |.|||.|.||:...|||||..:|||..|.|:|..||||.||.:..::|....|.|||.|:.|.|.
  Rat   548 CFPGFLGPDCARDSCPVLCGGNGEYEKGHCVCRNGWKGPECDVPEEQCIDPTCFGHGTCIMGVCI 612

  Fly  1153 CMRGYKGKFCEEVDCPHPNCSGHGFCADGTCICKKGWKGPDCATMDQDALQCLPDCSGHGTFDLD 1217
            |:.||||:.|||.||..|.||.||.|..|.|.|..||.|.:|.|   ....|...|||||||.||
  Rat   613 CVPGYKGEICEEEDCLDPMCSSHGICVKGECHCSTGWGGVNCET---PLPICQEQCSGHGTFLLD 674

  Fly  1218 TQTCTCEAKWSGDDCSKELCDLDCGQHGRCEGDACACDPEWGGEYCNTRLCDVRCNEHGQCKNGT 1282
            |..|:|:.||:|.|||.|||.::||.||.|....|.|:..|.|..|..|.|...|.|||||::|.
  Rat   675 TGVCSCDPKWTGSDCSTELCTMECGSHGVCSRGICQCEEGWVGPTCEERSCHSHCAEHGQCRDGK 739

  Fly  1283 CLCVTGWNGKHCTI--------EGCPNSCAGHGQCRVSGEGQWECRCYEGWDGPDCGIALELNCG 1339
            |.|..||.|.||||        :|||..|.|:|:|.:...| |.|.|..||.|..|.|.:|:.||
  Rat   740 CECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNG-WHCVCQVGWSGTGCNIVMEMLCG 803

  Fly  1340 DSKDNDKDGLVDCEDPECCASHVCKTSQLCVSAPKPIDVLLRKQP---PAITASFFERMKFLIDE 1401
            |:.|||.|||.||.||:||....|..|.||..:|.|:|::.:.||   ...:..|::|:||||.:
  Rat   804 DNLDNDGDGLTDCVDPDCCQQSNCYVSPLCQGSPDPLDLIQQSQPLFSQHTSRLFYDRIKFLIGK 868

  Fly  1402 SSLQNYAKLETFNESIFWNYFNASRSAVIRGRVVTSLGMGLVGVRVSTTTLLE-GFTLTRDDGWF 1465
            .|      .....:.|   .|::.|:.||||:||...|..||||.||.....: |||::|.||.|
  Rat   869 DS------THVVPQEI---SFDSRRACVIRGQVVAVDGTPLVGVNVSFLHHSDYGFTISRQDGSF 924

  Fly  1466 DLMVNGGGAVTLQFGRAPFRPQSRIVQVPWNEVVIIDLVVMSMSEEKGLAVTTTHTCFAHDYDLM 1530
            ||:..||.:|.|.|.|:||..:.|.:.:|||:.::::.|:|..      .|....:|...::...
  Rat   925 DLVAIGGISVVLIFERSPFLSEKRTLWLPWNQFIVVEKVIMQR------IVADPPSCDISNFISP 983

  Fly  1531 KPVVLASWKHGFQGACPDRSAILAESQVIQESLQIPGTGLNLVYHSSRAAGYLSTIKLQLTPDVI 1595
            .|:||.|....|.|:||:|..|:.|.||:||.:.||.:.:.|.|.|||..||.:.:::.||...|
  Rat   984 NPIVLPSPLTSFGGSCPERGTIVPELQVVQEEIPIPSSFVRLSYLSSRTPGYKTLLRILLTHSTI 1048

  Fly  1596 PTSLHLIHLRITIEGILFERIFEADPGIKFTYAWNRLNIYRQRVYGVTTAVVKVGYQYTDCTD-I 1659
            |..:..:||.:.:||.|.::.|.|...:.:|:|||:.:||.|:|:|:..|:|.|||:|..|.: |
  Rat  1049 PVGMIKVHLTVAVEGRLTQKWFPAAINLVYTFAWNKTDIYGQKVWGLAEALVSVGYEYEMCPEFI 1113

  Fly  1660 VWDIQTTKLSGHDMSISEVGGWNLDIHHRYNFHEGILQKGDGSNIYLRNKPRIILTTMGDGHQRP 1724
            :|:.:|..|.|.:|..|.:|||:|:.||.:|...||:.||:|.|:::..:|.:|.|.||:||||.
  Rat  1114 LWEQRTVVLQGFEMDASNLGGWSLNKHHIFNPQSGIIHKGNGENMFISQQPPVIATIMGNGHQRS 1178

  Fly  1725 LECPDCDGQATKQRLLAPVALAAAPDGSLFVGDFNYIRRIMTDGSIRTVVKL------NATRVSY 1783
            :.|.:|:|.|...:|.||||||:.||||::|||||::|||...|:..::::|      ::|..::
  Rat  1179 VACTNCNGPAHNNKLFAPVALASGPDGSVYVGDFNFVRRIFPSGNSVSILELRNRDTRHSTSPAH 1243

  Fly  1784 RYHMALSPLDGTLYVSDPESHQIIRVR---DTNDYSQPELNWEAVVGSGERCLPGDEAHCGDGAL 1845
            :|::|:.|:..:||:||..:.::.:::   :|.|.|:   |:|.|.|:|::|||.|::|||||..
  Rat  1244 KYYLAMDPMSESLYLSDTNTRKVYKLKSLVETKDLSK---NFEVVAGTGDQCLPFDQSHCGDGGK 1305

  Fly  1846 AKDAKLAYPKGIAISSDNILYFADGTNIRMVDRDGIVSTLIGNHMHKSHWKPIPCEGTLKLEEMH 1910
            |.:|.|..|:||.:.....:||.|||.||.:|.:.:::|:||::...| .:|:.|:..:.:.::.
  Rat  1306 ASEASLNSPRGITVDRHGFIYFVDGTMIRRIDENAVITTVIGSNGLTS-TQPLSCDSGMDITQVR 1369

  Fly  1911 LRWPTELAVSPMDNTLHIIDDHMILRMTPDGRVRVISGRPLHCATASTAY--DTDLATHATLVMP 1973
            |.|||:|||:||||:|:::|::::|:::.:.|||:|:|||:||......:  .:.:|.|:||...
  Rat  1370 LEWPTDLAVNPMDNSLYVLDNNIVLQISENRRVRIIAGRPIHCQVPGIDHFLVSKVAIHSTLESA 1434

  Fly  1974 QSIAFGPLGELYVAESDSQRINRVRVIGTDGRIAPFAGAESKCNC-LERGCDCFEAEHYLATSAK 2037
            ::|:....|.|::||:|.:::||::.:.|:|.|:..|||.:.|:| ::..||||..:...|..||
  Rat  1435 RAISVSHSGLLFIAETDERKVNRIQQVTTNGEISIIAGAPTDCDCKIDPNCDCFSGDGGYAKDAK 1499

  Fly  2038 FNTIAALAVTPDSHVHIADQANYRIRSVMSSIPEASPSREYEIYAPDMQEIYIFNRFGQHVSTRN 2102
            ....::|||:||..:::||..|.|||::..:....:....|||.:|..||:|.|...|.|:.|.|
  Rat  1500 MKAPSSLAVSPDGTLYVADLGNVRIRTISKNQAHLNDMNLYEIASPADQELYQFTVNGTHLHTMN 1564

  Fly  2103 ILTGETTYVFTYNVNTSNGKLSTVTDAAGNKVFLLRDYTSQVNSIENTKGQKCRLRMTRMKMLHE 2167
            ::|.:..|.||||   :.|.|..:|.:.||.|.:.||.......:....||...|.::...:|..
  Rat  1565 LITRDYVYNFTYN---AEGDLGAITSSNGNSVHIRRDAGGMPLWLVVPGGQVYWLTISSNGVLKR 1626

  Fly  2168 LSTPDNYNVT-YEYHGPTGLLRTKLDSTGRSYVYNYDEFGRLTSAVTPTGRVIELSFDLSVKGAQ 2231
            :|. ..||:. ..|.|.||||.||.:..|.:.||.||..|.||:|..|||.|.....||. |..:
  Rat  1627 VSA-QGYNLALMTYPGNTGLLATKSNENGWTTVYEYDPEGHLTNATFPTGEVSSFHSDLE-KLTK 1689

  Fly  2232 VKVS----ENAQKEMSLLIQGATVIVRNGAAESRTTVDMDGSTTSITPWGHNLQMEVAPYTILAE 2292
            |.:.    ||.....:|.......|::....:|...|..|||.......|..:.:...|:.:...
  Rat  1690 VALDTSNRENVLMSTNLTATSTIYILKQENTQSTYRVSPDGSLRVTFASGMEISLSSEPHILAGA 1754

  Fly  2293 QSPLLGE-SYPVPAKQRTEIAGDLANRFEWRYFVRRQQPLQAGKQSKGPPRPVTEVGRKLRVNGD 2356
            .:|.||: :..:|.:..       ||..|||         |..:|:||   .|:...|:||.:..
  Rat  1755 VNPTLGKCNISLPGEHN-------ANLIEWR---------QRKEQNKG---NVSAFERRLRAHNR 1800

  Fly  2357 NVLTLEYDRETQSVVVMVDDKQELLNVTYDRTSRPISFRPQSGDYADVDLEYDRFGRLVSWKWGV 2421
            |:|::::|..|::..:..|.::..|.:.||:|.|||.:.|.| .|.:|::.|...|.:...:.|.
  Rat  1801 NLLSIDFDHMTRTGKIYDDHRKFTLRILYDQTGRPILWSPVS-RYNEVNITYSPSGLVTFIQRGT 1864

  Fly  2422 LQEAYSFDRNGRLNEIKYGDGSTMVYAFKDMFGSLPLKVTTPRRSDYLLQYDDAGALQSLTTPRG 2486
            ..|...:|::|::....:.||....|.:.:.  |:.|.:.:.||  |:.:||.:..|.|:|.|..
  Rat  1865 WNEKTDYDQSGKIISRAWADGKIWSYTYLEK--SVMLLLHSQRR--YIFEYDQSDCLLSVTMPSM 1925

  Fly  2487 HIHAFSLQTSLGFFKYQYYSPINRHPFEILYNDEGQILAKIHPHQSGKVAFVHDTAGRLETILAG 2551
            ..|:.....|:|:::..|..|.:...|...|:.:|::|..:|.....:|.:.:....||..||..
  Rat  1926 VRHSLQTMLSVGYYRNIYTPPDSSTSFIQDYSRDGRLLQTLHLGTGRRVLYKYTKQARLSEILYD 1990

  Fly  2552 LSSTHYTYQDTTSLVKSVEVQEPGFELRREFKYHAGILKDEKLRFGSKNSLASARYKYAYDGNAR 2616
            .:....||::::.::|::.:...||.....::....::..:..|| |:..|.:||:.|:|: |.|
  Rat  1991 TTQVTLTYEESSGVIKTIHLMHDGFICTIRYRQTGPLIGRQIFRF-SEEGLVNARFDYSYN-NFR 2053

  Fly  2617 LSGIEMAIDDKELPTTRYKYSQNLGQLEVVQDLKITRNAFNRTVIQDSAKQF--FAIVDYDQHGR 2679
            ::.::..|::..||...|:|....|:.|                      ||  |::::||.:..
  Rat  2054 VTSMQAVINETPLPIDLYRYVDVSGRTE----------------------QFGKFSVINYDLNQV 2096

  Fly  2680 VKSVLMNVKNIDVFR-----LELDYDLRNRI----KSQKTTFGRSTAFD------------KINY 2723
            :.:.:|  |:..:|.     :|:.|::...|    ..|....||....|            ...|
  Rat  2097 ITTTVM--KHTKIFNANGQVIEVQYEILKAIAYWMTIQYDNMGRMVICDIRVGVDANITRYFYEY 2159

  Fly  2724 NADGHV--VEVLGTNNWKYLFDENGNTVGVVDQGEKFN---LGYDIGDRVIKVGDVEFNNYDARG 2783
            :|||.:  |.|.....|:|.:|.||| :.::..|....   |.||:.||:.::|:::: ..|..|
  Rat  2160 DADGQLQTVSVNDKTQWRYSYDLNGN-INLLSHGNSARLTPLRYDLRDRITRLGEIQY-KMDEDG 2222

  Fly  2784 FVVKRGEQKYRYNNRGQLIHSFERERFQSW---YYYDDRSRLVAWHDNKGNTTQYYYANPRTPHL 2845
            |:.:||...:.||:.|.|..::  .:...|   ||||...|.||...:.|...|::||:...|..
  Rat  2223 FLRQRGNDIFEYNSNGLLQKAY--NKVSGWTVQYYYDGLGRRVASKSSLGQHLQFFYADLANPIR 2285

  Fly  2846 VTHVHFPKISRTMKLFYDDRDMLIALE-HEDQRYYVATDQNGSPLAFFDQNGSIVKEMKRTPFGR 2909
            |||::....|....|:||.:..|||:| ...:.||||.|..|:|||.|...|.::||:..||:|.
  Rat  2286 VTHLYNHTSSEITSLYYDLQGHLIAMELSSGEEYYVACDNTGTPLAVFSSRGQVIKEILYTPYGD 2350

  Fly  2910 IIKDTKPEFFVPIDFHGGLIDPHTKLVYTEQRQYDPHVGQWMTP---LWETLATEMSHPTDVFIY 2971
            |..||.|:|.|.|.|||||.|..||||:..||.||...|:|.||   :|:.|..   .|....:|
  Rat  2351 IYHDTYPDFEVVIGFHGGLYDFLTKLVHLGQRDYDVVAGRWTTPNHHIWKQLNL---LPKPFNLY 2412

  Fly  2972 RYHNNDPINPNKPQN---YMIDLDSWLQLFGYDLNN---------MQSSRYT-KLAQYTPQASIK 3023
            .:.||.|:  .|.|:   |..|:.|||:|||:.|:|         :::...| :|.|      ::
  Rat  2413 SFENNYPV--GKIQDVAKYTTDIGSWLELFGFQLHNVLPGFPKPELENMELTYELLQ------LQ 2469

  Fly  3024 SNTLAPDFG-VISGLECIVEKTSEKFSDFDFVPKPLLKMEPKMR-------NLLPRVSYRRGVFG 3080
            :.|...|.| :|.|::|.::|....|...|.:|     |.|:..       ...||.:....|||
  Rat  2470 TKTQEWDPGKMILGIQCELQKQLRNFISLDQLP-----MTPQYNEGRCLEGGKQPRFAAVPSVFG 2529

  Fly  3081 EGVLLSRIGGRALVSVVDGSNSVVQDV--VSSVFNNSYFLD-LHFSIHDQDVFYFVKDNVLKLRD 3142
            :|:..:...|.....::..:|   :|.  ::::.||:::|: |||:|..:|..||:|  :..|.:
  Rat  2530 KGIKFAIKEGIVTADIIGVAN---EDSRRLAAILNNAHYLENLHFTIEGRDTHYFIK--LGSLEE 2589

  Fly  3143 D-----------------NEELRRLGGMFNISTHEISD----HGGSAAKELRLHGPDAVVIIKYG 3186
            |                 |..:.::..:.|..|...:|    ||.....            |:||
  Rat  2590 DLVLIGNTGGRRILENGVNVTVSQMTSVLNGRTRRFADIQLQHGALCFN------------IRYG 2642

  Fly  3187 VDPEQERHRILKHAHKRAVERAWELEKQLVAAGFQGRGDWTEEEKEELVQHGDVDGWNGIDIHSI 3251
            ...|:|::.:|:.|.:|||.:||..|::.:..|.:|...|||.||::|:..|.|.|::|..:.|:
  Rat  2643 TTVEEEKNHVLEMARQRAVAQAWTQEQRRLQEGEEGTRVWTEGEKQQLLGTGRVQGYDGYFVLSV 2707

  Fly  3252 HKYPQLADDPGNVAFQRDAKRKRR 3275
            .:|.:|:|...|:.|.|.::..||
  Rat  2708 EQYLELSDSANNIHFMRQSEIGRR 2731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ten-mNP_001262211.1 TNFRSF 1069..1198 CDD:304602 65/128 (51%)
CRD2 1106..1151 CDD:276900 20/44 (45%)
EGF_2 1139..1162 CDD:285248 12/22 (55%)
Keratin_B2 1162..1330 CDD:279797 83/175 (47%)
EGF_2 1167..1194 CDD:285248 13/26 (50%)
DUF3844 1171..>1235 CDD:289707 32/63 (51%)
EGF_2 <1272..1294 CDD:285248 12/21 (57%)
NHL 1750..2065 CDD:302697 119/326 (37%)
NHL repeat 1784..1830 CDD:271320 14/48 (29%)
NHL repeat 1854..1888 CDD:271320 13/33 (39%)
NHL repeat 1911..1950 CDD:271320 19/38 (50%)
NHL repeat 1972..2005 CDD:271320 9/32 (28%)
NHL repeat 2039..2065 CDD:271320 11/25 (44%)
RHS_repeat 2183..2218 CDD:283287 18/34 (53%)
RhsA 2347..3020 CDD:225750 206/720 (29%)
YD_repeat_2x 2795..2836 CDD:273728 14/43 (33%)
Rhs_assc_core 2905..2980 CDD:274730 35/77 (45%)
Tox-GHH 3193..3268 CDD:292269 26/74 (35%)
Tenm1XP_038956357.1 Ten_N 23..317 CDD:399476 64/401 (16%)
exchanger_TraA <534..>742 CDD:411343 106/210 (50%)
DSL <710..751 CDD:418607 18/40 (45%)
acid_disulf_rpt 802..827 CDD:411265 15/24 (63%)
NHL 1196..1527 CDD:302697 125/334 (37%)
NHL repeat 1196..1235 CDD:271320 19/38 (50%)
NHL repeat 1247..1290 CDD:271320 13/45 (29%)
NHL repeat 1314..1352 CDD:271320 14/37 (38%)
NHL repeat 1370..1409 CDD:271320 19/38 (50%)
NHL repeat 1433..1466 CDD:271320 9/32 (28%)
NHL repeat 1501..1527 CDD:271320 11/25 (44%)
RHS_repeat 1643..1675 CDD:398945 16/31 (52%)
RhsA 1824..>2393 CDD:225750 174/603 (29%)
Tox-GHH 2647..2724 CDD:406145 27/76 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D5817at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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