DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hem and GRL

DIOPT Version :9

Sequence 1:NP_524214.1 Gene:Hem / 40462 FlyBaseID:FBgn0011771 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_181056.2 Gene:GRL / 818077 AraportID:AT2G35110 Length:1425 Species:Arabidopsis thaliana


Alignment Length:1291 Identity:285/1291 - (22%)
Similarity:496/1291 - (38%) Gaps:284/1291 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IFPNQQKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
            :|||..:|...|                       :|..|...|:..||...||      ::|  
plant   108 VFPNHPRICTLL-----------------------SKKFPEHFSKLQLERIDKF------SLD-- 141

  Fly    70 GLNAIVNIKAEI-IKSLSLYYHTFVDLLDFKDNVCELLTTMDACQIHLDITLNFELTKYYLDLVV 133
                .::..||: ::||..:....:||:.|::....|:..:.:..|.|....|..:...::||..
plant   142 ----SLHDGAELHLQSLEPWIQLLLDLMAFREQALRLILDLSSTVITLLPHQNSLILHAFMDLFC 202

  Fly   134 TYVSLMIVLSRVEDRKAVLGLYNAAYELQNNQADTGF-PRLGQMILDYEVPLKKLAEEFIPHQRL 197
            .:|.:.:...:: .||.:|.:||..:.|..|..|..| .||.|.|..|:.|||.|.|:.      
plant   203 AFVRVNLFAEKI-PRKMLLQVYNLLHALSRNDRDCDFYHRLVQFIDSYDPPLKGLQEDL------ 260

  Fly   198 LTSALRSLTSIYALRNLPADKWREMQKLSLVGNPAILLKAVRTDTMSCEYIS------------- 249
                           |..:.:..|:  |..|| |:|.|.|......:..::|             
plant   261 ---------------NFVSPRIGEV--LEAVG-PSIFLSADTRKLRNEGFLSPYHPRFPDILTNS 307

  Fly   250 ---LEAMD--------RWIIFGLLLNHQMLGQYPEVNKIWLSALESSWVVALFRDEVLQIHQYI- 302
               :.|.|        .|::.|.|:....|.:...:: |.|..|:.:.||.|||||| .::|.: 
plant   308 AHPMRAQDLANVTSYREWVLLGYLVCPDELLRVTSID-IALVVLKENLVVTLFRDEV-SLYQMVC 370

  Fly   303 ---------QATFDGI----------KGY----------SKRIGE-------------------- 318
                     .|:.|.|          :.|          ||::.:                    
plant   371 EKEFGIGISFASADSINLTMQYILLHEDYQLYVLPRVLESKKMAKSGRTKQKEADLEYSVAKQVE 435

  Fly   319 --VKEAYNTAVQKAALMHRERRKFLRTALKELALIMTDQPGLLGPKAIFIFIGLCLARDEILWLL 381
              :.|.:..|:|....:|||||..|:..:..:.|..||||.||.|....:|..|.||:.|:||..
plant   436 KMISEVHEQALQLCDTIHRERRILLKQEIGRMVLFFTDQPSLLAPNIQMVFSALALAQSEVLWYF 500

  Fly   382 RHNDNPPLLKNKGKS------NEDLVDRQLPELLFHMEELRALVRKYSQVMQRYYVQYLS----- 435
            :|   ..:..::.|:      :.|..|..:..||..|:.|..|||||....:.|.:.|||     
plant   501 QH---AGIASSRSKAARVIPVDIDPNDPTIGFLLDGMDRLCCLVRKYISAARGYALSYLSSSAGR 562

  Fly   436 --------GFDATDLNIRM--------QSLQMCPEDESIIFSSLYNTAAALTVKQVEDNELFYFR 484
                    |..|.||:..:        |.|:..|:.:.       ...:|:|. .:.|       
plant   563 IRYLMGTPGIVALDLDPTLKGLFQRIVQHLESIPKAQG-------ENVSAITC-DLSD------- 612

  Fly   485 PFRLDWFRLQTYMSVGKAALRIAEHAELARLL----------DSMVFHTRVVDNLDEILVETSDL 539
             ||.||..:...::..::::.| .|.|.|.:.          ::....:|.||.|:..|.:...|
plant   613 -FRKDWLSILMIVTSSRSSINI-RHLEKATVSTGKEGLLSEGNAAYNWSRCVDELESQLSKHGSL 675

  Fly   540 SIFCFYNKMFDDQFHMCLEFP-AQNRYIIAFPLICSHFQNCTHEMCPEERHHIRERSLSVVNIFL 603
            ....||::.....|...:..| .:.::..|:..:.|.|..|...:.|||.......::..|...:
plant   676 KKLYFYHQHLTTVFRNTMFGPEGRPQHCCAWLSVASSFPECASLIIPEEVTKFGRDAVLYVESLI 740

  Fly   604 EEMAKEAKNIITTICDEQ--CTMADALLPKHCAKILSVQSARKKKDKSKSKHFDDIRKPGDESYR 666
            |.:....:.:|..:..|.  ..:...|||:..|..|:..|..........:.......||.|||.
plant   741 ESIMGGLEGLINILDSEGGFGALESQLLPEQAAAYLNNASRISAPSVKSPRVVGGFTLPGHESYP 805

  Fly   667 KTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQ----NLEHRFSRDLVGMVMFN 727
            :..:.:..::.....||.||..:|....:.|....|..|||:.:    |.:.||...|       
plant   806 ENNKSIKMLEAAIQRLTNLCSILNDMEPICVINHVFVLREYMRECILGNFKRRFLTAL------- 863

  Fly   728 QETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYN--- 789
            |...::.:||.|.:.:|.:|.::...|.:|.:|:|:.....||  |:|...    .:::|:.   
plant   864 QTDNDLQRPSVLESLIRRHMGIVHLAEQHVSMDLTQGIREILL--TEAFSG----PVSSLHTFEK 922

  Fly   790 ----------------TWYSEVLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRA 838
                            .||.:.:::.||...|:|:...|.|....|.|  .:..:..:||.||:|
plant   923 PAEQQQTTGSAVEVVCNWYMDNIIKDVSGAGILFAPRHKYFKSTRPVG--GYFAESVTDLKELQA 985

  Fly   839 LAELVGPYGIKTLNETLMWHIANQVQELKSLVSTNKEVLITLRTSFDKPEVMKE--QFKRLQDVD 901
            ...:.|.||:..|:..:..|.|..|..:::.:.:|:|::.....|....:.::.  ..:::.|:|
plant   986 FVRIFGGYGVDRLDRMMKVHTAALVNCIETSLRSNRELIEAAAASMHSGDRVERDASVRQIVDLD 1050

  Fly   902 RVLQRMTIIGVIICFRNLVHEALVDVLDKRIPFLLSSVKDFQEH----LPGGDQIRVASEMASAA 962
            .|:......|..:.|.:|:.||...||:.....:.|.:....||    :|...:||....:|:..
plant  1051 TVIGFCIEAGQALAFDDLLAEASGAVLEDNASLIHSMISGIVEHIPEEIPEKKEIRRIKGVANGV 1115

  Fly   963 GLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMVFVAVSIPKLARNENSFYRATIDGHSNNTHCM 1027
            |:....|......:..   |.......:..||..|.|..:...|.|...|...| .|.|||.||:
plant  1116 GVAGDHDSEWVRLILE---EVGGANDNSWSLLPYFFASFMTSNAWNTTGFNIET-GGFSNNIHCL 1176

  Fly  1028 AAAINNIF-GALFT------------------------------ICGQSDMEDRMKEFLALASSS 1061
            |..|:.:. |:.:.                              :..::.::..|..|:..|:|.
plant  1177 ARCISAVIAGSEYVRLQREYQQQHQSLSNGHHSSENLDSEFPPRVTAEASIKSSMLLFVKFAASI 1241

  Fly  1062 LLRLGQESDKEATRNRESIYLL-LDEIVKQSPFLTMDLLESCFPYVLIRNAYHGVY 1116
            :|    :|..||.|:.....|: ||::.:.||:|....|||..||.::|:.|...|
plant  1242 VL----DSWSEANRSHLVAKLIFLDQLCEISPYLPRSSLESHVPYTILRSIYTQYY 1293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HemNP_524214.1 Nckap1 12..1118 CDD:286778 282/1284 (22%)
GRLNP_181056.2 Nckap1 73..1295 CDD:286778 285/1291 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 204 1.000 Domainoid score I839
eggNOG 1 0.900 - - E1_KOG1917
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8384
Inparanoid 1 1.050 204 1.000 Inparanoid score I1295
OMA 1 1.010 - - QHG54606
OrthoDB 1 1.010 - - D138196at2759
OrthoFinder 1 1.000 - - FOG0003146
OrthoInspector 1 1.000 - - oto3091
orthoMCL 1 0.900 - - OOG6_103432
Panther 1 1.100 - - LDO PTHR12093
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.880

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