DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hem and nckap1

DIOPT Version :9

Sequence 1:NP_524214.1 Gene:Hem / 40462 FlyBaseID:FBgn0011771 Length:1126 Species:Drosophila melanogaster
Sequence 2:XP_005167978.1 Gene:nckap1 / 561894 ZFINID:ZDB-GENE-030131-4426 Length:1134 Species:Danio rerio


Alignment Length:1128 Identity:673/1128 - (59%)
Similarity:862/1128 - (76%) Gaps:23/1128 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PNQQKIAEKLIILNDRGLGILTRIYNIK------KACGDTKSKPGFLSEKSLESSIKFIVKRFPN 65
            |:|||:||||.||||||:|:||||||||      |||||.|:||.:|.:|:|||::||||::||.
Zfish     8 PSQQKLAEKLTILNDRGIGMLTRIYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKFPA 72

  Fly    66 IDVKGLN----AIVNIKAEIIKSLSLYYHTFVDLLDFKDNVCELLTTMDACQIHLDITLNFELTK 126
            ::.:..|    .:...|:||:|:|:|||.||||:::|||:|||||.|:||||:..|||:||:|||
Zfish    73 VETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTIDACQVFFDITVNFDLTK 137

  Fly   127 YYLDLVVTYVSLMIVLSRVEDRKAVLGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEF 191
            .||||||||.:||::|||:|:|||::||||.|:|:.:..:|..:|||||||:|||.||||:.|||
Zfish   138 NYLDLVVTYTTLMLLLSRIEERKAIIGLYNYAHEMTHGSSDREYPRLGQMIVDYENPLKKMMEEF 202

  Fly   192 IPHQRLLTSALRSLTSIYALRNLPADKWREMQKLSLVGNPAILLKAVRTDTMSCEYISLEAMDRW 256
            :||.:.|:.||.||..:|..|||.||:||..|.|||:..|:.:|...::|||.|||:||:.|::|
Zfish   203 VPHGKSLSDALVSLQMVYPRRNLSADQWRNAQLLSLISAPSTMLNPAQSDTMPCEYLSLDTMEKW 267

  Fly   257 IIFGLLLNHQMLGQYPEVNKIWLSALESSWVVALFRDEVLQIHQYIQATFDGIKGYSKRIGEVKE 321
            |:||.:|.|..|...|....:|..||:||..:.||||||..||:..:..|..|:||:||:.:::|
Zfish   268 IVFGFILCHAALNSDPAALSLWKLALQSSTCLCLFRDEVFHIHKAAEDLFVNIRGYNKRVNDIRE 332

  Fly   322 AYNTAVQKAALMHRERRKFLRTALKELALIMTDQPGLLGPKAIFIFIGLCLARDEILWLLRHNDN 386
            ...:|:..|..||||||||||:||||||.::.||||||||||:|:|:.|..|||||:|||||.||
Zfish   333 CKESALSHAGSMHRERRKFLRSALKELATVLADQPGLLGPKALFVFMALSFARDEIIWLLRHADN 397

  Fly   387 PPLLKNKGKSNEDLVDRQLPELLFHMEELRALVRKYSQVMQRYYVQYLSGFDATDLNIRMQSLQM 451
                 .:.||.:|.:|:.:.||:|:||||||.||||..|||||||||||||||..||..:|:|.:
Zfish   398 -----IQKKSTDDFIDKHIAELIFYMEELRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSV 457

  Fly   452 CPEDESIIFSSLYNTAAALTVKQVEDNELFYFRPFRLDWFRLQTYMSVGKAALRIAEHAELARLL 516
            ||||||||.||..||..:|:||||||.|:|.||..||||||||.|.||.||:|.:|:|.||.:::
Zfish   458 CPEDESIIMSSFVNTMTSLSVKQVEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMM 522

  Fly   517 DSMVFHTRVVDNLDEILVETSDLSIFCFYNKMFDDQFHMCLEFPAQNRYIIAFPLICSHFQNCTH 581
            ::::|||::||:|.|:|||||||||||||::.|:..|..|||.|:|:||.|:|||:|:||.:|||
Zfish   523 NTIIFHTKMVDSLVEMLVETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSISFPLLCTHFMSCTH 587

  Fly   582 EMCPEERHHIRERSLSVVNIFLEEMAKEAKNIITTICDEQCTMADALLPKHCAKILSVQSARKKK 646
            |:||||||||.:||||:.|:||:||||:|:|:||.||.||||::|.||||||||.:| |:..||.
Zfish   588 ELCPEERHHIGDRSLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTIS-QAVNKKS 651

  Fly   647 DKSKSKHFDDIR-KPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQ 710
            .|...|..:..| |||.||.||.|..:|.:||||.||:||||:|||.|.:.|||..|.|||||..
Zfish   652 KKQTGKKGEPEREKPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMMVWEHTFTPREYLTS 716

  Fly   711 NLEHRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQA 775
            :||.||::.:|||.|:||.|.|||||||||.||||||.|||::||||.|||||||||.||||||.
Zfish   717 HLEIRFTKSIVGMTMYNQTTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQH 781

  Fly   776 LDSHGEKTIAALYNTWYSEVLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALA 840
            ||||||.||.:||..||.|.|||:||.|:|.:....||||.:..|..:.||.:|:||::|:|:|:
Zfish   782 LDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLS 846

  Fly   841 ELVGPYGIKTLNETLMWHIANQVQELKSLVSTNKEVLITLRTSFDKPEVMKEQFKRLQDVDRVLQ 905
            ||:||||:|.|:|:|||||::||.|||.||..|.|||..:|||||||:.|...||||..||.||:
Zfish   847 ELLGPYGMKFLSESLMWHISSQVAELKKLVVDNVEVLTQMRTSFDKPDHMAALFKRLTSVDSVLK 911

  Fly   906 RMTIIGVIICFRNLVHEALVDVLDKRIPFLLSSVKDFQEHLPGGDQIRVAS---EMASAAGLLCK 967
            ||||||||:.||:|..|||.|||...||||:|||:||::|:|....::||.   |::|||||.|:
Zfish   912 RMTIIGVILSFRSLAQEALRDVLSCHIPFLVSSVEDFKDHIPRETDMKVAMNVYELSSAAGLPCE 976

  Fly   968 VDPTLATTLKSKKPE--FDEGEHLTACLLMVFVAVSIPKLARNENSFYRATIDGHSNNTHCMAAA 1030
            :||.|...|.|:|.|  ..|.|:..|||||||||||:|.||.|..|.|...|:||.||.||:|.|
Zfish   977 IDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSMPTLASNVMSQYSPAIEGHCNNIHCLAKA 1041

  Fly  1031 INNIFGALFTICGQSDMEDRMKEFLALASSSLLRLGQESDKEATRNRESIYLLLDEIVKQSPFLT 1095
            ||.|..||||| .:..:|||:||||||||||||::|||:||..||||||:|||||.||::|||||
Zfish  1042 INQIAAALFTI-HKGSIEDRLKEFLALASSSLLKIGQETDKTTTRNRESVYLLLDMIVQESPFLT 1105

  Fly  1096 MDLLESCFPYVLIRNAYHGVYKQ 1118
            ||||||||||||:|||||.||||
Zfish  1106 MDLLESCFPYVLLRNAYHAVYKQ 1128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HemNP_524214.1 Nckap1 12..1118 CDD:286778 667/1121 (60%)
nckap1XP_005167978.1 Nckap1 13..1128 CDD:286778 667/1121 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586933
Domainoid 1 1.000 1328 1.000 Domainoid score I9
eggNOG 1 0.900 - - E1_KOG1917
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8384
Inparanoid 1 1.050 1347 1.000 Inparanoid score I131
OMA 1 1.010 - - QHG54606
OrthoDB 1 1.010 - - D138196at2759
OrthoFinder 1 1.000 - - FOG0003146
OrthoInspector 1 1.000 - - oto40994
orthoMCL 1 0.900 - - OOG6_103432
Panther 1 1.100 - - LDO PTHR12093
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2541
SonicParanoid 1 1.000 - - X2542
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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