DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hem and nckap1l

DIOPT Version :9

Sequence 1:NP_524214.1 Gene:Hem / 40462 FlyBaseID:FBgn0011771 Length:1126 Species:Drosophila melanogaster
Sequence 2:XP_002935704.2 Gene:nckap1l / 100491829 XenbaseID:XB-GENE-953118 Length:1128 Species:Xenopus tropicalis


Alignment Length:1121 Identity:541/1121 - (48%)
Similarity:771/1121 - (68%) Gaps:18/1121 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QQKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVKG--- 70
            |.|:||||:||||||.|:|.|||||||.|.:||:||.|.:|||:|||||:|.|:||||||:.   
 Frog     8 QHKLAEKLMILNDRGKGVLIRIYNIKKTCSETKTKPPFFTEKSMESSIKYINKKFPNIDVRSSTQ 72

  Fly    71 -LNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNVCELLTTMDACQIHLDITLNFELTKYYLDLVVT 134
             |..:...|:||:|.||.||.:|||:::|:|:|.|||.|:||||.:.||.:|:..||.||||:||
 Frog    73 HLGPVHKEKSEIVKCLSSYYLSFVDVMEFRDHVYELLNTIDACQCYFDININYSFTKSYLDLIVT 137

  Fly   135 YVSLMIVLSRVEDRKAVLGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRLLT 199
            |.|:::::||:||||:::.|:|.|.|:....:|..:.||.||:|:|:.|||||:|||.||.:.:|
 Frog   138 YFSVILLMSRIEDRKSLVALFNCASEMLQGHSDPTYARLAQMLLEYDNPLKKLSEEFGPHTKTVT 202

  Fly   200 SALRSLTSIYALRNLPADKWREMQKLSLVGNPAILLKAVRTDTMSCEYISLEAMDRWIIFGLLLN 264
            .||.||..::..|..|||:||..|.|||:.|||.::....:|||.|||:|:|.|:|||:.|.||:
 Frog   203 EALMSLRFLFCRRTQPADQWRGAQLLSLLSNPASMIDPSSSDTMPCEYLSVETMERWIVIGFLLS 267

  Fly   265 HQMLGQYPEVNKIWLSALESSWVVALFRDEVLQIHQYIQATFDGIKGYSKRIGEVKEAYNTAVQK 329
            |..|...|...::|..||:.|..:.|.|||:|.||:..:..|..||||.||:.:|||.....:..
 Frog   268 HGFLNTVPASMELWKLALQGSHCITLIRDEILFIHRVTEDFFGSIKGYGKRVADVKECKEHFMTH 332

  Fly   330 AALMHRERRKFLRTALKELALIMTDQPGLLGPKAIFIFIGLCLARDEILWLLRHNDNPPLLKNKG 394
            ....||.||.|||:|:|||..|::|:||||||||:|.|:.|...||||.||:||.:|    ..|.
 Frog   333 CGQFHRARRFFLRSAVKELEAILSDEPGLLGPKALFAFMALSFCRDEINWLVRHAEN----ITKT 393

  Fly   395 KSNEDLVDRQLPELLFHMEELRALVRKYSQVMQRYYVQYLSGFDATDLNIRMQSLQMCPEDESII 459
            |:.||.||.|:.||:|::|.:||:|:|:..|:|:|::|||:.|||..|:..:|:|.:|||:||:|
 Frog   394 KTPEDYVDVQIAELIFYVEAIRAIVKKHLSVIQKYHIQYLARFDALVLSDVIQNLTVCPEEESVI 458

  Fly   460 FSSLYNTAAALTVKQVEDNELFYFRPFRLDWFRLQTYMSVGKAALRIAEHAELARLLDSMVFHTR 524
            .||..:|.:||:|||||:.|.|.|...||||||||.|.|:.||.|.:.::.:|.::::.::||:.
 Frog   459 MSSFVSTLSALSVKQVENKETFDFCALRLDWFRLQAYTSIAKAPLSLRDNPDLGKVMNLIMFHSW 523

  Fly   525 VVDNLDEILVETSDLSIFCFYNKMFDDQFHMCLEFPAQNRYIIAFPLICSHFQNCTHEMCPEERH 589
            ::|:::|:||||||||.|||:.:.|:..|.|.:|.|:..||.||||||||||.:..|||||||..
 Frog   524 MLDSVEELLVETSDLSAFCFHVRTFEKMFLMTMEEPSALRYSIAFPLICSHFSSSIHEMCPEEYP 588

  Fly   590 HIRERSLSVVNIFLEEMAKEAKNIITTICDEQCTMADALLPKHCAKILSVQSARKKKDKSKSKHF 654
            |::..||...|.||:||:|.|.|....||.|||.:::.|||||||..:| ::..|:..|...|..
 Frog   589 HLKNCSLGFCNNFLDEMSKHASNCAMDICAEQCNLSEKLLPKHCAATIS-KARNKRLKKPPPKRA 652

  Fly   655 DDIR-KPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLEHRFSR 718
            :..| |||.||.|:.|...|.:||||:.|.||..|:|:..::.|:|....|.|||..:||:||.|
 Frog   653 EPEREKPGAESQRRDRSVTTNLDKLHLTLCELSMALNHVRSIRVFEHVVTPAEYLSSHLENRFGR 717

  Fly   719 DLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKT 783
            .||.||.|.|.|.||.:|||:|..:|:|::.|:::.:.|:||:||:..:.||||||..|::||.|
 Frog   718 ALVNMVNFKQTTREILRPSEVLHGMRSYLSTLKSIGHLVNIDVTRIIRSSLLQQTQPTDANGEPT 782

  Fly   784 IAALYNTWYSEVLLRRVSAGNIVFSINQKAF--VPISPEGWVPFNPQEFSDLNELRALAELVGPY 846
            |.|||..||.|.|||:.|||.|::|..::.|  :|....|....|.:|:||::|::||:||:|||
 Frog   783 ITALYTNWYLECLLRQASAGFIIYSPARRTFMDLPTEMSGEQGLNAEEYSDVSEMKALSELIGPY 847

  Fly   847 GIKTLNETLMWHIANQVQELKSLVSTNKEVLITLRTSFDKPEVMKEQFKRLQDVDRVLQRMTIIG 911
            |:|.|:|.||||:.:|:.|||.||..|.:||:.:|::|...|:|.....:|...:.:|:||||||
 Frog   848 GMKFLSENLMWHVTSQIVELKKLVIENMDVLVQIRSNFSNSELMPSLLAKLSSPENLLKRMTIIG 912

  Fly   912 VIICFRNLVHEALVDVLDKRIPFLLSSVKDFQEHLPGGDQIRVA---SEMASAAGLLCKVDPTLA 973
            ||:.||.|..|.|.:|.....||::|.::..::.:.....|:|.   .|:|:|||:.|.|||:|.
 Frog   913 VILSFRALTQEGLREVFAHHCPFIMSPIESLKDLVNPDIDIQVTLSIFELATAAGVPCDVDPSLV 977

  Fly   974 TTLKSKKPEFD--EGEHLTACLLMVFVAVSIPKLARNENSFYRATIDGHSNNTHCMAAAINNIFG 1036
            ..|.:.|.:..  |.|:..||||.||:|||:|.||.:..|||....||::||.||:|.||..:..
 Frog   978 AALSNIKTDSASLEEEYKVACLLQVFLAVSLPLLASDPMSFYSIENDGYNNNIHCLAKAIIQVSA 1042

  Fly  1037 ALFTICGQSDMEDRMKEFLALASSSLLRLGQESDKEATRNRESIYLLLDEIVKQSPFLTMDLLES 1101
            ||||:..: ::|..:||||.:||.|||:||:|:||...||||||.:||..||::|.|||:|:|||
 Frog  1043 ALFTLYNK-NIETHLKEFLLMASGSLLQLGEETDKSKARNRESILILLHLIVEESSFLTVDMLES 1106

  Fly  1102 CFPYVLIRNAYHGVYK 1117
            ||||||:|||||.|::
 Frog  1107 CFPYVLLRNAYHEVHR 1122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HemNP_524214.1 Nckap1 12..1118 CDD:286778 539/1118 (48%)
nckap1lXP_002935704.2 Nckap1 11..1123 CDD:370644 539/1118 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54606
OrthoDB 1 1.010 - - D138196at2759
OrthoFinder 1 1.000 - - FOG0003146
OrthoInspector 1 1.000 - - otm48728
Panther 1 1.100 - - O PTHR12093
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2542
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.030

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