DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hem and nckap1

DIOPT Version :9

Sequence 1:NP_524214.1 Gene:Hem / 40462 FlyBaseID:FBgn0011771 Length:1126 Species:Drosophila melanogaster
Sequence 2:XP_004917966.1 Gene:nckap1 / 100379683 XenbaseID:XB-GENE-949166 Length:1141 Species:Xenopus tropicalis


Alignment Length:1142 Identity:675/1142 - (59%)
Similarity:863/1142 - (75%) Gaps:31/1142 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARPIF-PNQQKIAEKLIILNDRGLGILTRIYNIK------KACGDTKSKPGFLSEKSLESSIKF 58
            |:|.:. |:|||:||||.||||||:|:|||:||||      |||||.|:||.:|.:|:|||::||
 Frog     1 MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKF 65

  Fly    59 IVKRFPNIDVKGLN----AIVNIKAEIIKSLSLYYHTFVDLLDFKDNVCELLTTMDACQIHLDIT 119
            ||::||.::.:..|    .:...|:||:|:|:|||.||||:::|||:|||||.|:|.||:..|||
 Frog    66 IVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTIDVCQVFFDIT 130

  Fly   120 LNFELTKYYLDLVVTYVSLMIVLSRVEDRKAVLGLYNAAYELQNNQADTGFPRLGQMILDYEVPL 184
            :||:|||.||||:|||.:|||:|||:|:|||::||||.::|:.:..:|..:|||||||:|||.||
 Frog   131 VNFDLTKNYLDLIVTYTTLMIMLSRIEERKAIIGLYNYSHEMTHGASDREYPRLGQMIVDYENPL 195

  Fly   185 KKLAEEFIPHQRLLTSALRSLTSIYALRNLPADKWREMQKLSLVGNPAILLKAVRTDTMSCEYIS 249
            ||:.|||:||.:.|:.||.||..:|..|||.|::||..|.|||:..|:.:|...::|||.|||:|
 Frog   196 KKMMEEFVPHSKSLSDALISLQMVYPRRNLSAEQWRNAQLLSLISAPSTMLNPAQSDTMPCEYLS 260

  Fly   250 LEAMDRWIIFGLLLNHQMLGQYPEVNKIWLSALESSWVVALFRDEVLQIHQYIQATFDGIKGYSK 314
            |:||::|||||.:|.|.:|........:|..||:||..:.|:||||..||:..:..|..|:||:|
 Frog   261 LDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLCLYRDEVFHIHKAAEDLFVNIRGYNK 325

  Fly   315 RIGEVKEAYNTAVQKAALMHRERRKFLRTALKELALIMTDQPGLLGPKAIFIFIGLCLARDEILW 379
            ||.:::|....||..|...|||||||||:||||||.::.||||||||||:|:|:.|..|||||:|
 Frog   326 RINDIRECKENAVSHAGATHRERRKFLRSALKELATVLADQPGLLGPKALFVFMALSFARDEIIW 390

  Fly   380 LLRHNDNPPLLKNKGKSNEDLVDRQLPELLFHMEELRALVRKYSQVMQRYYVQYLSGFDATDLNI 444
            ||||.||.|     .|..:|.:|:.:.||:|:||||||.||||..|||||||||||||||..||.
 Frog   391 LLRHADNIP-----KKVADDFMDKHIAELIFYMEELRAHVRKYGPVMQRYYVQYLSGFDAVVLNE 450

  Fly   445 RMQSLQMCPEDESIIFSSLYNTAAALTVKQVEDNELFYFRPFRLDWFRLQTYMSVGKAALRIAEH 509
            .:|:|.:||||||||.||..||..:|:||||||.|:|.||..||||||||.|.||.||:|.:|:|
 Frog   451 LVQNLSVCPEDESIIMSSFVNTMTSLSVKQVEDGEVFDFRGMRLDWFRLQAYTSVSKASLSLADH 515

  Fly   510 AELARLLDSMVFHTRVVDNLDEILVETSDLSIFCFYNKMFDDQFHMCLEFPAQNRYIIAFPLICS 574
            .||.:::::::|||::||:|.|:|||||||||||||::.|:..|..|||.|:|:||.|:|||||:
 Frog   516 RELGKMMNTIIFHTKMVDSLVEMLVETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSISFPLICT 580

  Fly   575 HFQNCTHEMCPEE-------RHHIRERSLSVVNIFLEEMAKEAKNIITTICDEQCTMADALLPKH 632
            ||.:||||:||||       ||||.:||||:.|:||:||||:|:|:||.||.||||::|.|||||
 Frog   581 HFMSCTHELCPEEVIFINSQRHHIGDRSLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKH 645

  Fly   633 CAKILSVQSARKKKDKSKSKHFDDIR-KPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVN 696
            |||.:| |:..||..|...|..:..| |||.||.||.|..:|.:||||.||:||||:|||.|.:.
 Frog   646 CAKTIS-QAVNKKSKKQTGKKGEPEREKPGVESMRKNRLVVTNLDKLHTALSELCFSINYAPNMV 709

  Fly   697 VWEFAFAPREYLCQNLEHRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDI 761
            |||..|.|||||..:||.||::.:|||.|:||.|.|||||||||.||||||.|||::||||.|||
 Frog   710 VWEHTFTPREYLTSHLEIRFTKSIVGMTMYNQVTQEIAKPSELLTSVRAYMTVLQSIENYVQIDI 774

  Fly   762 TRVFNNCLLQQTQALDSHGEKTIAALYNTWYSEVLLRRVSAGNIVFSINQKAFVPISPEGWVPFN 826
            ||||||.||||||.||||||.||.:||..||.|.|||:||.|:|.:....||||.:..|..:.||
 Frog   775 TRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFN 839

  Fly   827 PQEFSDLNELRALAELVGPYGIKTLNETLMWHIANQVQELKSLVSTNKEVLITLRTSFDKPEVMK 891
            .:|:||::|:|||:||:||||:|.|:|:|||||::||.|||.||..|.|||..:||||||||.|.
 Frog   840 AEEYSDISEMRALSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVEVLTQMRTSFDKPEQMA 904

  Fly   892 EQFKRLQDVDRVLQRMTIIGVIICFRNLVHEALVDVLDKRIPFLLSSVKDFQEHLPGGDQIRVAS 956
            ..||||..||.||:||||||||:.||:|..|||.|||...||||:|||:||::|:|....::||.
 Frog   905 ALFKRLTSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSVEDFKDHIPRETDMKVAM 969

  Fly   957 ---EMASAAGLLCKVDPTLATTLKSKKPE--FDEGEHLTACLLMVFVAVSIPKLARNENSFYRAT 1016
               |::|||||.|::||.|...|.|:|.|  ..|.|:..|||||||||||:|.||.|..|.|...
 Frog   970 NVYELSSAAGLPCEIDPALVVALSSQKSETISPEEEYKIACLLMVFVAVSLPTLASNVMSQYSPA 1034

  Fly  1017 IDGHSNNTHCMAAAINNIFGALFTICGQSDMEDRMKEFLALASSSLLRLGQESDKEATRNRESIY 1081
            |:||.||.||:|.|||.|..||||| .:..:|||:||||||||||||::|||:||..||||||:|
 Frog  1035 IEGHCNNIHCLAKAINQIAAALFTI-HKGSIEDRLKEFLALASSSLLKIGQETDKTTTRNRESVY 1098

  Fly  1082 LLLDEIVKQSPFLTMDLLESCFPYVLIRNAYHGVYKQ 1118
            ||||.||::|||||||||||||||||:|||||.||||
 Frog  1099 LLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQ 1135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HemNP_524214.1 Nckap1 12..1118 CDD:286778 667/1128 (59%)
nckap1XP_004917966.1 Nckap1 13..1135 CDD:370644 667/1128 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 1292 1.000 Domainoid score I9
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8384
Inparanoid 1 1.050 1336 1.000 Inparanoid score I146
OMA 1 1.010 - - QHG54606
OrthoDB 1 1.010 - - D138196at2759
OrthoFinder 1 1.000 - - FOG0003146
OrthoInspector 1 1.000 - - otm48728
Panther 1 1.100 - - LDO PTHR12093
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2541
SonicParanoid 1 1.000 - - X2542
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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