DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srpk79D and AT5G22840

DIOPT Version :9

Sequence 1:NP_001246881.1 Gene:Srpk79D / 40461 FlyBaseID:FBgn0025702 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_197675.1 Gene:AT5G22840 / 832347 AraportID:AT5G22840 Length:538 Species:Arabidopsis thaliana


Alignment Length:707 Identity:213/707 - (30%)
Similarity:296/707 - (41%) Gaps:253/707 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 SDSSLYVSDEEQEDASQYCRGGYHPVVIGDIFDNRFRVVR-KLGWGHFSTVWLCRDLKDEKYVAL 375
            ||:|.|.|  |.|....|.|||||.|.:||.|.|...|:: ||||||||||||..|..:.:||||
plant    11 SDASDYSS--EDEGTEDYRRGGYHTVRVGDTFKNGSYVIQSKLGWGHFSTVWLAWDTLNSRYVAL 73

  Fly   376 KVVKSAPHYIETAADEIRLLEAIRDADPMDVKRERIVRLMNHFTVRGVNGMHTCLVFEALGCSLY 440
            |:.|||.||.|.|.|||::|:.|.:.|..|  ::.:|:|::||...|.||.|.|:|||.||.:|.
plant    74 KIQKSAQHYTEAAMDEIKILKQIAEGDAED--KKCVVKLLDHFKHAGPNGQHVCMVFEYLGDNLL 136

  Fly   441 KLIVKNNYQGLAIAQVRNIIRQVLEGLDYLHSKCSIIHTDIKPENILLVIDNAAAMNQQIDDEIN 505
            .:|..::|:|:.:..|:.|...:|.||||||.:.||||||||||||||.        ..||.|.:
plant   137 SVIKYSDYRGVPLHMVKEICFHILVGLDYLHRELSIIHTDIKPENILLC--------STIDPEAD 193

  Fly   506 SLRVKGVDFPDSYISSIEKQTKSRAKWPLIEPNGSTNTNTNTSNSTATNSNSSTPLAAVIMSTLD 570
            : |..|:                    ||:.|               |..:.:.|...|     :
plant   194 A-RKSGI--------------------PLVLP---------------TVKDKAVPERPV-----E 217

  Fly   571 KEDTTT-TTSSTLNSNTTSSLASKYSSLLGDSECNGGLGGSANINNRYRTEKKITAKSSGDCDED 634
            ||...: |.|:.|..|....:..|...:.|..|           |.|                  
plant   218 KEKPKSYTYSADLTKNQKKKIRKKAKKVEGSEE-----------NER------------------ 253

  Fly   635 AESDTLGEQSTLASTMDSPTDLDPEPELDSKPNTVPEPSEGPIPEQPTPNSTNSSCPSHNTATIA 699
                                                             :|:||....:..||:.
plant   254 -------------------------------------------------DSSNSEARPNGNATVE 269

  Fly   700 KSKINSNILSTCTSLTSTNEYCFTNTNTTTASTPSAPPSATPSSAPALASATPPSTCTPSFTQIA 764
            :.:                                                              
plant   270 RLE-------------------------------------------------------------- 272

  Fly   765 PSATAPATSTTCTTSAEFYDGDHKTTSTSTTTTSNAISSATTTTATTTTAIAKLNVHANAIPSQN 829
                                           .:|..:..|                       :|
plant   273 -------------------------------ESSERVKDA-----------------------EN 283

  Fly   830 QSQSSQNN----TYTIQSLIDNSNVRVKIADLGNACYDYHHFTEDIQTRQYRSIEVLLGAPYNYT 890
            .||.|:.|    ..|.|.|:.:.:.:.|:.|.||||:.|..||.||||||||..||:||:.|:.:
plant   284 VSQKSRGNRRGSQSTRQKLLADVDRKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVVLGSKYSTS 348

  Fly   891 ADIWSTACLAFELATGDYLFDPHAGESYSRDEDHLAHIVELLGSIPQSVIFRGKHGLKYFTSYGS 955
            ||:||.||:.|||||||.|||||:||::.|||||||.::||||.:|:.:...|:|...:|...|.
plant   349 ADMWSFACICFELATGDVLFDPHSGENFERDEDHLALMMELLGMMPRKIALGGRHSRDFFNRQGE 413

  Fly   956 LRNITKLKPWSLMNVLVEKYDWDPVEAKKFSDFLLPMLEYNPVIRASAAECLQHPWL 1012
            ||:|.:|:.|.|..||.:|||:...:|....||:.|:|::.|..|.:||:||.||||
plant   414 LRHIRRLRFWPLSKVLTDKYDFSEEDAIAMQDFITPILQFVPEKRPTAAQCLTHPWL 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Srpk79DNP_001246881.1 STKc_SRPK 336..>504 CDD:271038 81/168 (48%)
S_TKc 347..>492 CDD:214567 74/145 (51%)
STKc_SRPK <844..1012 CDD:271038 83/167 (50%)
AT5G22840NP_197675.1 STKc_SRPK 34..470 CDD:271038 198/680 (29%)
S_TKc 45..470 CDD:214567 193/669 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 201 1.000 Domainoid score I866
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 377 1.000 Inparanoid score I545
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8407
orthoMCL 1 0.900 - - OOG6_100556
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.830

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