DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Srpk79D and SRPK4

DIOPT Version :9

Sequence 1:NP_001246881.1 Gene:Srpk79D / 40461 FlyBaseID:FBgn0025702 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_566977.1 Gene:SRPK4 / 824469 AraportID:AT3G53030 Length:529 Species:Arabidopsis thaliana


Alignment Length:703 Identity:216/703 - (30%)
Similarity:297/703 - (42%) Gaps:244/703 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 SSDSSLYVSDEEQEDASQYCRGGYHPVVIGDIF-DNRFRVVRKLGWGHFSTVWLCRDLKDEKYVA 374
            :||...|.|  |.|....|.|||||.|.|||.| ..|:.|..||||||||||||..|.:..:|||
plant     7 NSDGGEYTS--EDEGTEDYRRGGYHAVRIGDSFKTGRYVVQSKLGWGHFSTVWLSWDTQSSRYVA 69

  Fly   375 LKVVKSAPHYIETAADEIRLLEAIRDADPMDVKRERIVRLMNHFTVRGVNGMHTCLVFEALGCSL 439
            |||.|||.||.|.|.|||.:|:.|.:.|..|.|  .:|:|::||...|.||.|.|:|||.||.:|
plant    70 LKVQKSAQHYTEAAMDEITILQQIAEGDTDDTK--CVVKLLDHFKHSGPNGQHVCMVFEYLGDNL 132

  Fly   440 YKLIVKNNYQGLAIAQVRNIIRQVLEGLDYLHSKCSIIHTDIKPENILLVIDNAAAMNQQIDDEI 504
            ..||..::|:||.|..|:.|...:|.||||||.:.||||||:||||:||                
plant   133 LTLIKYSDYRGLPIPMVKEICYHMLVGLDYLHKQLSIIHTDLKPENVLL---------------- 181

  Fly   505 NSLRVKGVDFPDSYISSIEKQTKSRAKWPLIEPNGSTNTNTNTSNSTATNSNSSTPLAAVIMSTL 569
                       .|.|...:...||.|  ||:.|.                               
plant   182 -----------PSTIDPSKDPRKSGA--PLVLPT------------------------------- 202

  Fly   570 DKEDTTTTTSSTLNSNTTSSLASKYSSLLGDSECNGGLGGSANINNRYRTEKKITAKSSGDCDED 634
            ||::|      .::||             ||...|...|.        ..:.|::|:...:...:
plant   203 DKDNT------VVDSN-------------GDFVKNQKTGS--------HRKAKLSAQGHAENKGN 240

  Fly   635 AESDTLGEQSTLASTMDSPTDLDPEPELDSKPNTVPEPSEGPIPEQPTPNSTNSSCPSHNTATIA 699
            .|||                          |...|..|..|                        
plant   241 TESD--------------------------KVRGVGSPVNG------------------------ 255

  Fly   700 KSKINSNILSTCTSLTSTNEYCFTNTNTTTASTPSAPPSATPSSAPALASATPPSTCTPSFTQIA 764
                     ..|.:..|..|.|                   ||::.|:.                
plant   256 ---------KQCAAEKSVEEDC-------------------PSTSDAIE---------------- 276

  Fly   765 PSATAPATSTTCTTSAEFYDGDHKTTSTSTTTTSNAISSATTTTATTTTAIAKLNVHANAIPSQN 829
                              .||..|...                                  ..:.
plant   277 ------------------LDGSEKGKQ----------------------------------GGKK 289

  Fly   830 QSQSSQNNTYTIQSLIDNSNVRVKIADLGNACYDYHHFTEDIQTRQYRSIEVLLGAPYNYTADIW 894
            .|:||:.:      |:.:::::.|:.|.||||:.|..||.||||||||..||:||:.|:.:||:|
plant   290 GSRSSRRH------LVASADLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVILGSKYSTSADLW 348

  Fly   895 STACLAFELATGDYLFDPHAGESYSRDEDHLAHIVELLGSIPQSVIFRGKHGLKYFTSYGSLRNI 959
            |.||:.|||.|||.|||||:|::|.|||||||.::||||.:|:.:...|::...:|..:|.||:|
plant   349 SFACICFELVTGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHI 413

  Fly   960 TKLKPWSLMNVLVEKYDWDPVEAKKFSDFLLPMLEYNPVIRASAAECLQHPWL 1012
            .:|:.|.:..||.|||::...:|...||||:.:|::.|..|.:||:||.|||:
plant   414 RRLRFWPMNKVLTEKYEFSEQDANDLSDFLVSILDFVPEKRPTAAQCLLHPWI 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Srpk79DNP_001246881.1 STKc_SRPK 336..>504 CDD:271038 83/168 (49%)
S_TKc 347..>492 CDD:214567 77/144 (53%)
STKc_SRPK <844..1012 CDD:271038 81/167 (49%)
SRPK4NP_566977.1 STKc_SRPK 31..466 CDD:271038 203/675 (30%)
S_TKc 42..466 CDD:214567 197/664 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 201 1.000 Domainoid score I866
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8407
orthoMCL 1 0.900 - - OOG6_100556
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.780

Return to query results.
Submit another query.