DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srpk79D and Srpk2

DIOPT Version :9

Sequence 1:NP_001246881.1 Gene:Srpk79D / 40461 FlyBaseID:FBgn0025702 Length:1018 Species:Drosophila melanogaster
Sequence 2:XP_038963154.1 Gene:Srpk2 / 296753 RGDID:1305107 Length:749 Species:Rattus norvegicus


Alignment Length:789 Identity:301/789 - (38%)
Similarity:409/789 - (51%) Gaps:125/789 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 LSLSLSPPLNRRRDMPALRGPFV-SLSEPRGTLSTTDEIYPDSSDSSLYVSDEEQEDASQYCRGG 333
            :|::.....:..|..|..:.|.| ....|.......|.:.|:..:..|...||||||.:.||:||
  Rat    38 MSVNSEKSSSSERPEPQQKAPLVPPPPPPPPPPPLPDPVPPEPEEEILGSDDEEQEDPADYCKGG 102

  Fly   334 YHPVVIGDIFDNRFRVVRKLGWGHFSTVWLCRDLKDEKYVALKVVKSAPHYIETAADEIRLLEAI 398
            ||||.|||:|:.|:.|:||||||||||||||.|::.:::||:||||||.||.|||.|||:||:.:
  Rat   103 YHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCV 167

  Fly   399 RDADPMDVKRERIVRLMNHFTVRGVNGMHTCLVFEALGCSLYKLIVKNNYQGLAIAQVRNIIRQV 463
            |::||.|..::.:|:|::.|.:.|:||:|.|:|||.||..|.|.|:|:|||||.:..|::|||||
  Rat   168 RESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQV 232

  Fly   464 LEGLDYLHSKCSIIHTDIKPENILLVIDNAAAMNQQIDDEINSLRVKGVDFPDSYISSIEKQTKS 528
            |:|||||||||.||||||||||||:.:|.|..  :::..|....:..|...|.....|...|.| 
  Rat   233 LQGLDYLHSKCKIIHTDIKPENILMCVDGAYV--RRMAAEATEWQKAGAPPPSGSAVSTAPQQK- 294

  Fly   529 RAKWPLIEPNGSTNTNTNTSNSTATNSNSSTPLAAVIMSTLD--KEDTTTTTSSTLNSNTTSSLA 591
                    |.|..:.|............     |.::...|.  :|.........|..||||:.|
  Rat   295 --------PIGKISKNKKKKLKKKQKRQ-----AELLEKRLQEIEELEREAERKILEENTTSAEA 346

  Fly   592 SKYSSLLGDSECNGGLG-GSANINNRYRTEKKITAKSSGDCDEDAESDTLGEQSTLASTMDSPTD 655
            |...    |.||...:. ..|.:.:   |.::.|||.:|:.::..|.:...:::|     :...|
  Rat   347 SSEQ----DGECQPEVKLKEAELED---TTEEETAKDNGEVEDQEEKEDTEKENT-----EKDED 399

  Fly   656 LDPEPELDSKPNTVPEPSEGP-----------IPEQPTPNSTNSSCPSHNTATIAKSKINSNILS 709
             |.|.||:   |..|...|.|           :.||...:..:......|.......:.|:.   
  Rat   400 -DVEQELE---NIDPTWMESPKANGHIENGLFLLEQQLEDEEDEEDDCANPEEYNLDEPNAE--- 457

  Fly   710 TCTSLTSTNEYCFTNTNTTTASTPSAPPSATPSSAPALASATPPSTCTPSFTQIAPSATAPATST 774
              :..|.::.|...|....... |.:|...||..:..|......|..:.......|..::|:...
  Rat   458 --SDYTYSSSYEQFNGELPNGQ-PKSPEFPTPLFSGPLEPVASDSVLSEGSPLTEPEESSPSRDR 519

  Fly   775 TCTTSAEFYDGDHKTTSTSTTTTSNAISSATTTTATTTTAIAKLNVHANAIPSQNQSQSSQNNTY 839
            :.|.||                      |:|.....|.|..|.|.|  |.:..||..:       
  Rat   520 SRTVSA----------------------SSTGDLPKTKTRAADLLV--NPLDPQNADK------- 553

  Fly   840 TIQSLIDNSNVRVKIADLGNACYDYHHFTEDIQTRQYRSIEVLLGAPYNYTADIWSTACLAFELA 904
                      :|||||||||||:.:.|||||||||||||||||:||.|:..||||||||:|||||
  Rat   554 ----------IRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELA 608

  Fly   905 TGDYLFDPHAGESYSRDEDHLAHIVELLGSIPQ-------------------SVIFR-------- 942
            ||||||:||:||.|||||||:|||:|||||||:                   ::|..        
  Rat   609 TGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRDHIALIIELLGKVPRK 673

  Fly   943 ----GKHGLKYFTSYGSLRNITKLKPWSLMNVLVEKYDWDPVEAKKFSDFLLPMLEYNPVIRASA 1003
                ||:..::||..|.||:|||||||||.:||||||.|...:|.:|:|||:||||..|..||||
  Rat   674 YAMLGKYSKEFFTRKGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASA 738

  Fly  1004 AECLQHPWL 1012
            .|||:||||
  Rat   739 GECLRHPWL 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Srpk79DNP_001246881.1 STKc_SRPK 336..>504 CDD:271038 97/167 (58%)
S_TKc 347..>492 CDD:214567 88/144 (61%)
STKc_SRPK <844..1012 CDD:271038 114/198 (58%)
Srpk2XP_038963154.1 PKc_like 103..>291 CDD:419665 103/189 (54%)
2A1904 <338..417 CDD:273344 25/94 (27%)
PKc_like <538..747 CDD:419665 120/227 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45924
orthoMCL 1 0.900 - - OOG6_100556
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.780

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